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In this paper we introduce the first efficient external-memory algorithm to compute the bisimilarity equivalence classes of a directed acyclic graph (DAG). DAGs are commonly used to model data in a wide variety of practical applications,…

Data Structures and Algorithms · Computer Science 2018-03-05 Jelle Hellings , George H. L. Fletcher , Herman Haverkort

This work considers clustering nodes of a largely incomplete graph. Under the problem setting, only a small amount of queries about the edges can be made, but the entire graph is not observable. This problem finds applications in…

Machine Learning · Computer Science 2021-10-04 Shahana Ibrahim , Xiao Fu

We consider the PC-algorithm Spirtes et. al. (2000) for estimating the skeleton of a very high-dimensional acyclic directed graph (DAG) with corresponding Gaussian distribution. The PC-algorithm is computationally feasible for sparse…

Statistics Theory · Mathematics 2007-06-13 Markus Kalisch , Peter Buehlmann

Spectral clustering is a popular method for community detection in network graphs: starting from a matrix representation of the graph, the nodes are clustered on a low dimensional projection obtained from a truncated spectral decomposition…

Machine Learning · Statistics 2022-08-10 Francesco Sanna Passino , Nicholas A. Heard , Patrick Rubin-Delanchy

The feed-forward relationship naturally observed in time-dependent processes and in a diverse number of real systems -such as some food-webs and electronic and neural wiring- can be described in terms of so-called directed acyclic graphs…

Physics and Society · Physics 2015-05-19 Joaquín Goñi , Bernat Corominas-Murtra , Ricard V. Solé , Carlos Rodríguez-Caso

In this paper we propose a new approach to detect clusters in undirected graphs with attributed vertices. We incorporate structural and attribute similarities between the vertices in an augmented graph by creating additional vertices and…

Machine Learning · Computer Science 2023-02-07 Pasqua D'Ambra , Panayot S. Vassilevski , Luisa Cutillo

Semi-supervised clustering is a basic problem in various applications. Most existing methods require knowledge of the ideal cluster number, which is often difficult to obtain in practice. Besides, satisfying the must-link constraints is…

Optimization and Control · Mathematics 2025-03-07 Wei Liu , Xin Liu , Michael K. Ng , Zaikun Zhang

This paper considers a general data-fitting problem over a networked system, in which many computing nodes are connected by an undirected graph. This kind of problem can find many real-world applications and has been studied extensively in…

Machine Learning · Computer Science 2017-04-14 Ying Zhang

In the $k$-Disjoint Shortest Paths ($k$-DSP) problem, we are given a weighted graph $G$ on $n$ nodes and $m$ edges with specified source vertices $s_1, \dots, s_k$, and target vertices $t_1, \dots, t_k$, and are tasked with determining if…

Data Structures and Algorithms · Computer Science 2024-05-13 Shyan Akmal , Virginia Vassilevska Williams , Nicole Wein

In complex multivariate systems, interactions among variables are defined by dependency structures, often encoded as directed acyclic graphs ($\text{DAGs}$). However, dependency structures can vary across subjects, and ignoring this…

Machine Learning · Statistics 2026-05-20 Honglin Du , Muxuan Liang , Xiang Zhong

Graph algorithms enormously contribute to the domains such as blockchains, social networks, biological networks, telecommunication networks, and several others. The ever-increasing demand of data-volume, as well as speed of such…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-03-04 Bapi Chatterjee , Sathya Peri , Muktikanta Sa

Comparing directed acyclic graphs is essential in various fields such as healthcare, social media, finance, biology, and marketing. DAGs often result from contagion processes over networks, including information spreading, retweet activity,…

Human-Computer Interaction · Computer Science 2024-08-31 Kathrin Guckes , Marc Schäpers , Margit Pohl , Andreas Kerren , Tatiana von Landesberger

Understanding the global organization of complicated and high dimensional data is of primary interest for many branches of applied sciences. It is typically achieved by applying dimensionality reduction techniques mapping the considered…

Computational Geometry · Computer Science 2024-11-11 Paweł Dłotko , Davide Gurnari , Mathis Hallier , Anna Jurek-Loughrey

We study large-scale, distributed graph clustering. Given an undirected graph, our objective is to partition the nodes into disjoint sets called clusters. A cluster should contain many internal edges while being sparsely connected to other…

Data Structures and Algorithms · Computer Science 2020-04-28 Michael Hamann , Ben Strasser , Dorothea Wagner , Tim Zeitz

Although many algorithms have been designed to construct Bayesian network structures using different approaches and principles, they all employ only two methods: those based on independence criteria, and those based on a scoring function…

Artificial Intelligence · Computer Science 2011-07-04 S. Acid , L. M. de Campos

Dense subgraph discovery is a key primitive in many graph mining applications, such as detecting communities in social networks and mining gene correlation from biological data. Most studies on dense subgraph mining only deal with one…

Social and Information Networks · Computer Science 2018-02-21 Yu Yang , Lingyang Chu , Yanyan Zhang , Zhefeng Wang , Jian Pei , Enhong Chen

Identifying clusters of similar elements in a set is a common task in data analysis. With the immense growth of data and physical limitations on single processor speed, it is necessary to find efficient parallel algorithms for clustering…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-08-09 Mélanie Cambus , Davin Choo , Havu Miikonen , Jara Uitto

In this paper, we study classes of graphs with three types of edges that capture the modified independence structure of a directed acyclic graph (DAG) after marginalisation over unobserved variables and conditioning on selection variables…

Other Statistics · Statistics 2013-12-18 Kayvan Sadeghi

We define and study analogs of probabilistic tree embedding and tree cover for directed graphs. We define the notion of a DAG cover of a general directed graph $G$: a small collection $D_1,\dots D_g$ of DAGs so that for all pairs of…

Data Structures and Algorithms · Computer Science 2025-04-16 Sepehr Assadi , Gary Hoppenworth , Nicole Wein

Due to its human-interpretability and invariance properties, Directed Acyclic Graph (DAG) has been a foundational tool across various areas of AI research, leading to significant advancements. However, DAG learning remains highly…

Machine Learning · Computer Science 2025-06-24 Naiyu Yin , Tian Gao , Yue Yu
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