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In recent years, Graph Neural Networks (GNNs) have achieved remarkable success in many graph mining tasks. However, scaling them to large graphs is challenging due to the high computational and storage costs of repeated feature propagation…

Machine Learning · Computer Science 2025-04-11 Yuxuan Liang , Wentao Zhang , Zeang Sheng , Ling Yang , Quanqing Xu , Jiawei Jiang , Yunhai Tong , Bin Cui

Large genomic and imaging datasets can be used to train models that learn meaningful representations of cellular systems. Across domains, model performance improves predictably with dataset size and compute budget, providing a basis for…

Quantitative Methods · Quantitative Biology 2026-02-23 Gokul Gowri , Igor Sadalski , Dan Raviv , Peng Yin , Jonathan Rosenfeld , Allon M. Klein

To improve the robustness of graph neural networks (GNN), graph structure learning (GSL) has attracted great interest due to the pervasiveness of noise in graph data. Many approaches have been proposed for GSL to jointly learn a clean graph…

Machine Learning · Computer Science 2023-07-06 Shaogao Lv , Gang Wen , Shiyu Liu , Linsen Wei , Ming Li

Robust loss minimization is an important strategy for handling robust learning issue on noisy labels. Current robust loss functions, however, inevitably involve hyperparameter(s) to be tuned, manually or heuristically through cross…

Machine Learning · Computer Science 2020-02-18 Jun Shu , Qian Zhao , Keyu Chen , Zongben Xu , Deyu Meng

Neural networks are widespread due to their powerful performance. Yet, they degrade in the presence of noisy labels at training time. Inspired by the setting of learning with expert advice, where multiplicative weights (MW) updates were…

Machine Learning · Computer Science 2025-11-12 Noga Bar , Tomer Koren , Raja Giryes

Graph convolutional learning has led to many exciting discoveries in diverse areas. However, in some applications, traditional graphs are insufficient to capture the structure and intricacies of the data. In such scenarios, multigraphs…

Machine Learning · Computer Science 2023-04-26 Landon Butler , Alejandro Parada-Mayorga , Alejandro Ribeiro

Learning low-dimensional representations on graphs has proved to be effective in various downstream tasks. However, noises prevail in real-world networks, which compromise networks to a large extent in that edges in networks propagate…

Social and Information Networks · Computer Science 2020-12-07 Junshan Wang , Ziyao Li , Qingqing Long , Weiyu Zhang , Guojie Song , Chuan Shi

Compositionality is a basic structural feature of both biological and artificial neural networks. Learning compositional functions via gradient descent incurs well known problems like vanishing and exploding gradients, making careful…

Neural and Evolutionary Computing · Computer Science 2021-01-11 Jeremy Bernstein , Jiawei Zhao , Markus Meister , Ming-Yu Liu , Anima Anandkumar , Yisong Yue

Multiview datasets are common in scientific and engineering applications, yet existing fusion methods offer limited theoretical guarantees, particularly in the presence of heterogeneous and high-dimensional noise. We propose Generalized…

Machine Learning · Statistics 2026-02-12 Xiucai Ding , Chao Shen , Hau-Tieng Wu

State-of-the art vision models can achieve superhuman performance on image classification tasks when testing and training data come from the same distribution. However, when models are tested on corrupted images (e.g. due to scale changes,…

Machine Learning · Computer Science 2019-06-11 Luke Metz , Niru Maheswaranathan , Jonathon Shlens , Jascha Sohl-Dickstein , Ekin D. Cubuk

Spatial multi-modal omics technology, highlighted by Nature Methods as an advanced biological technique in 2023, plays a critical role in resolving biological regulatory processes with spatial context. Recently, graph neural networks based…

Genomics · Quantitative Biology 2024-12-19 Xinlei Huang , Zhiqi Ma , Dian Meng , Yanran Liu , Shiwei Ruan , Qingqiang Sun , Xubin Zheng , Ziyue Qiao

The vulnerability of deep neural networks to adversarial examples has motivated an increasing number of defense strategies for promoting model robustness. However, the progress is usually hampered by insufficient robustness evaluations. As…

Machine Learning · Computer Science 2021-10-19 Xiao Yang , Yinpeng Dong , Wenzhao Xiang , Tianyu Pang , Hang Su , Jun Zhu

In multimodal graph learning, graph structures that integrate information from multiple sources, such as vision and text, can more comprehensively model complex entity relationships. However, the continuous growth of their data scale poses…

Machine Learning · Computer Science 2026-02-10 Lian Shen , Zhendan Chen , Meijia Song , Yinhui jiang , Ziming Su , Juan Liu , Xiangrong Liu

Multireference alignment (MRA) problem is to estimate an underlying signal from a large number of noisy circularly-shifted observations. The existing methods are always proposed under the hypothesis of a single Gaussian noise. However, the…

Optimization and Control · Mathematics 2021-07-23 Cuicui Zhao , Jun Liu , Xinqi Gong

We extend the data augmentation technique PANDA by Li et al. (2018) that regularizes single graph estimation to jointly learning multiple graphical models with various node types in a unified framework. We design two types of noise to…

Methodology · Statistics 2019-05-23 Yinan Li , Xiao Liu , Fang Liu

Despite advances in deep learning, robustness under domain shift remains a major bottleneck in medical imaging settings. Findings on natural images suggest that deep neural models can show a strong textural bias when carrying out image…

Image and Video Processing · Electrical Eng. & Systems 2021-06-29 Seoin Chai , Daniel Rueckert , Ahmed E. Fetit

Despite the success of deep neural networks (DNNs) in image classification tasks, the human-level performance relies on massive training data with high-quality manual annotations, which are expensive and time-consuming to collect. There…

Machine Learning · Computer Science 2019-04-15 Junnan Li , Yongkang Wong , Qi Zhao , Mohan Kankanhalli

We tackle the problem of learning linear classifiers from noisy datasets in a multiclass setting. The two-class version of this problem was studied a few years ago by, e.g. Bylander (1994) and Blum et al. (1996): in these contributions, the…

Machine Learning · Computer Science 2014-03-21 Ugo Louche , Liva Ralaivola

We propose DoPAMINE, a new neural network based multiplicative noise despeckling algorithm. Our algorithm is inspired by Neural AIDE (N-AIDE), which is a recently proposed neural adaptive image denoiser. While the original N-AIDE was…

Image and Video Processing · Electrical Eng. & Systems 2019-02-08 Sunghwan Joo , Sungmin Cha , Taesup Moon

The sample selection approach is very popular in learning with noisy labels. As deep networks learn pattern first, prior methods built on sample selection share a similar training procedure: the small-loss examples can be regarded as clean…

Machine Learning · Computer Science 2023-09-06 Xiaobo Xia , Pengqian Lu , Chen Gong , Bo Han , Jun Yu , Jun Yu , Tongliang Liu