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AI scientist systems are increasingly deployed for autonomous research, yet their academic integrity has never been systematically evaluated. We introduce SCIINTEGRITY-BENCH, the first benchmark designed around a dilemmatic evaluation…

Artificial Intelligence · Computer Science 2026-05-12 Zonglin Yang , Xingtong Liu , Xinyan Xu

Large language models are increasingly being assembled into medical multi-agent systems that emulate multidisciplinary consultation through specialist roles, peer review and consensus formation. In clinical decision support, however,…

Computation and Language · Computer Science 2026-05-28 Yinghao Zhu , Lei Gu , Zixiang Wang , Haoran Sang , Dehao Sui , Wen Tang , Lan Mi , Yasha Wang , Junyi Gao , Liang Yao , Tianfan Fu , Ewen Harrison , Lequan Yu , Liantao Ma

Reproducing computational research is often assumed to be as simple as rerunning the original code with provided data. In practice, missing packages, fragile file paths, version conflicts, or incomplete logic frequently cause analyses to…

Software Engineering · Computer Science 2026-04-24 Syed Mehtab Hussain Shah , Frank Hopfgartner , Arnim Bleier

Agentic AI systems are increasingly being integrated into scientific workflows, yet their behavior under realistic conditions remains insufficiently understood. We evaluate CMBAgent across two workflow paradigms and eighteen astrophysical…

Artificial Intelligence · Computer Science 2026-04-29 Shivam Rawat , Lucie Flek

As data-science agents shift from co-pilots to auto-pilots, silent misframing becomes a critical failure mode. Agents quietly commit to plausible but unintended task framings, producing clean, executable artifacts that hide their incorrect…

Artificial Intelligence · Computer Science 2026-05-12 Josefa Lia Stoisser , Marc Boubnovski Martell , Sidsel Boldsen , Kaspar Märtens , Robert Kitchen

The integration of Large Language Models (LLMs) into scientific discovery is currently hindered by the Implicit Context problem, where governing equations extracted from literature contain invisible thermodynamic assumptions (e.g.,…

Databases · Computer Science 2026-03-11 Yue Wua , Tianhao Su , Rui Hu , Mingchuan Zhao , Shunbo Hu , Deng Pan , Jizhong Huang

AI agents hold the potential to revolutionize scientific productivity by automating literature reviews, replicating experiments, analyzing data, and even proposing new directions of inquiry; indeed, there are now many such agents, ranging…

Software testing has progressed toward intelligent automation, yet current AI-based test generators still suffer from static, single-shot outputs that frequently produce invalid, redundant, or non-executable tests due to the lack of…

Software Engineering · Computer Science 2026-01-07 Saba Naqvi , Mohammad Baqar , Nawaz Ali Mohammad

Recent advances in large language models (LLMs) have fueled the vision of automated scientific discovery, often called AI Co-Scientists. To date, prior work casts these systems as generative co-authors responsible for crafting hypotheses,…

Computation and Language · Computer Science 2025-05-20 Guijin Son , Jiwoo Hong , Honglu Fan , Heejeong Nam , Hyunwoo Ko , Seungwon Lim , Jinyeop Song , Jinha Choi , Gonçalo Paulo , Youngjae Yu , Stella Biderman

We present Prover Agent, a novel AI agent for automated theorem proving that integrates large language models (LLMs) with a formal proof assistant, Lean. Prover Agent coordinates an informal reasoning LLM, a formal prover model, and…

Artificial Intelligence · Computer Science 2026-02-18 Kaito Baba , Chaoran Liu , Shuhei Kurita , Akiyoshi Sannai

The scholarly publishing ecosystem faces a dual crisis of unmanageable submission volumes and unregulated AI, creating an urgent need for new governance models to safeguard scientific integrity. The traditional human-only peer review regime…

Artificial Intelligence · Computer Science 2025-10-03 Khalid M. Saqr

Agent evaluation requires assessing complex multi-step behaviors involving tool use and intermediate reasoning, making it costly and expertise-intensive. A natural question arises: can frontier coding assistants reliably automate this…

Scientific experimentation, a cornerstone of human progress, demands rigor in reliability, methodical control, and interpretability to yield meaningful results. Despite the growing capabilities of large language models (LLMs) in automating…

As autonomous code agents move toward end-to-end software development, evaluating their practical autonomy becomes critical. Current benchmarks hide friction by testing agents in pre-configured environments, and their static evaluation…

Software Engineering · Computer Science 2026-05-14 Hao Guan , Lingyue Fu , Shao Zhang , Yaoming Zhu , Kangning Zhang , Lin Qiu , Xunliang Cai , Xuezhi Cao , Weiwen Liu , Weinan Zhang , Yong Yu

Large Language Models demonstrate remarkable capabilities yet remain fundamentally probabilistic, presenting critical reliability challenges for enterprise deployment. We introduce the Six Sigma Agent, a novel architecture that achieves…

Artificial Intelligence · Computer Science 2026-02-02 Khush Patel , Siva Surendira , Jithin George , Shreyas Kapale

Academic citation integrity faces persistent challenges, with research indicating 20% of citations contain errors and manual verification requiring months of expert time. This paper presents a novel AI-powered methodology for systematic,…

Digital Libraries · Computer Science 2025-11-10 L. J. Janse van Rensburg

The promise of AI-driven scientific discovery hinges on whether AI agents can autonomously design and execute the computational workflows that underpin modern science. Molecular dynamics (MD) simulation presents a natural test bed to…

Artificial Intelligence · Computer Science 2026-05-12 Vinay Kumar , Satyendra Rajput , Mausam , N. M. Anoop Krishnan

Large language model (LLM)-based systems are increasingly deployed to conduct scientific research autonomously, yet whether their reasoning adheres to the epistemic norms that make scientific inquiry self-correcting is poorly understood.…

Are AI agents tools, co-authors, or researchers? We present a quantified case study ($N=1$): a physicist supervising an AI coding agent (Claude Code, Sonnet and Opus models) over 12 work days and 57 sessions to build CLAX-PT, a…

Artificial Intelligence · Computer Science 2026-05-29 Nhat-Minh Nguyen

Proof engineering is notoriously labor-intensive: proofs that are straightforward on paper often require lengthy scripts in theorem provers. Recent advances in large language models (LLMs) create new opportunities for proof automation:…

Programming Languages · Computer Science 2026-01-08 Yichen Xu , Martin Odersky
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