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Related papers: QHap: Quantum-Inspired Haplotype Phasing

200 papers

Post-training quantization (PTQ) is essential for deploying LLMs under memory and bandwidth constraints. However, extreme low-bit quantization remains highly sensitive to activation outliers and anisotropic weight curvature. Existing…

Machine Learning · Computer Science 2026-05-29 Artur Zagitov , Gleb Molodtsov , Aleksandr Beznosikov

Conformation generation, also known as molecular unfolding (MU), is a crucial step in structure-based drug design, remaining a challenging combinatorial optimization problem. Quantum annealing (QA) has shown great potential for solving…

The continually increasing volume of DNA sequence data has resulted in a growing demand for fast implementations of core algorithms. Computation of pairwise alignments between candidate haplotypes and sequencing reads using Pair-HMMs is a…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-01-27 Bertil Schmidt , Felix Kallenborn , Alexander Wichmann , Alejandro Chacon , Christian Hundt

Gradient descent is a fundamental algorithm in both theory and practice for continuous optimization. Identifying its quantum counterpart would be appealing to both theoretical and practical quantum applications. A conventional approach to…

Quantum Physics · Physics 2023-03-03 Jiaqi Leng , Ethan Hickman , Joseph Li , Xiaodi Wu

Quantum Signal Processing (QSP) is a technique that can be used to implement a polynomial transformation $P(x)$ applied to the eigenvalues of a unitary $U$, essentially implementing the operation $P(U)$, provided that $P$ satisfies some…

Quantum Physics · Physics 2023-03-21 Lorenzo Laneve

Single individual haplotyping is an NP-hard problem that emerges when attempting to reconstruct an organism's inherited genetic variations using data typically generated by high-throughput DNA sequencing platforms. Genomes of diploid…

Machine Learning · Computer Science 2019-09-04 Somsubhra Barik , Haris Vikalo

Exploration of task mappings plays a crucial role in achieving high performance in heterogeneous multi-processor system-on-chip (MPSoC) platforms. The problem of optimally mapping a set of tasks onto a set of given heterogeneous processors…

Performance · Computer Science 2014-07-01 Wei Quan , Andy D. Pimentel

Due to the sparse connectivity of superconducting quantum computers, qubit communication via SWAP gates accounts for the vast majority of overhead in quantum programs. We introduce a method for improving the speed and reliability of SWAPs…

Quantum Physics · Physics 2021-09-28 Pranav Gokhale , Teague Tomesh , Martin Suchara , Frederic T. Chong

In this study, we present an innovative methodology to classify quantum phases within the ANNNI (Axial Next-Nearest Neighbor Ising) model by combining Quantum Machine Learning (QML) techniques with the Shapley Additive Explanations (SHAP)…

Although RF fingerprinting is one of the most commonly used techniques for localization, deploying it in a ubiquitous manner requires addressing the challenge of supporting a large number of heterogeneous devices and their variations. We…

Quantum Physics · Physics 2022-07-05 Ahmed Shokry , Moustafa Youssef

Quantum computing promises breakthroughs in simulating and solving complex, classically intractable problems. However, current noisy intermediate-scale quantum (NISQ) devices are relatively small and error-prone, prohibiting large-scale…

Quantum Physics · Physics 2026-03-24 Gary J Mooney

The MaxCut problem is a fundamental problem in Combinatorial Optimization, with significant implications across diverse domains such as logistics, network design, and statistical physics. The algorithm represents innovative approaches that…

Quantum Physics · Physics 2025-01-03 Paulo A. Viana , Fernando M. de Paula Neto

Haplotype Inference is a challenging problem in bioinformatics that consists in inferring the basic genetic constitution of diploid organisms on the basis of their genotype. This information allows researchers to perform association studies…

Artificial Intelligence · Computer Science 2007-08-06 Luca Di Gaspero , Andrea Roli

Among the genetic algorithms generally used for optimization problems in the recent decades, quantum-inspired variants are known for fast and high-fitness convergence and small resource requirement. Here the application to the patient…

Neural and Evolutionary Computing · Computer Science 2025-06-06 Akira SaiToh , Arezoo Modiri , Amit Sawant , Robabeh Rahimi

This letter is a proof of concept for quantum power flow (QPF) algorithms which underpin various unprecedentedly efficient power system analytics exploiting quantum computing. Our contributions are three-fold: 1) Establish a…

Quantum Physics · Physics 2021-04-13 Fei Feng , Yifan Zhou , Peng Zhang

We develop a new class of genetic algorithm that computationally determines efficient pulse sequences to implement a quantum gate U in a three-qubit system. The method is shown to be quite general, and the same algorithm can be used to…

Quantum Physics · Physics 2009-12-04 Ashok Ajoy , Anil Kumar

In the context of evolutionary quantum computing in the literal meaning, a quantum crossover operation has not been introduced so far. Here, we introduce a novel quantum genetic algorithm which has a quantum crossover procedure performing…

Neural and Evolutionary Computing · Computer Science 2014-02-05 Akira SaiToh , Robabeh Rahimi , Mikio Nakahara

Qubit mapping is essential to quantum computing's fidelity and quantum computers' resource utilization. Yet, the existing qubit mapping schemes meet some challenges (e.g., crosstalk, SWAP overheads, diverse device topologies, etc.), leading…

Hardware Architecture · Computer Science 2022-08-01 Lei Liu , Xinglei Dou

The generalized quadratic assignment problem (GQAP) is one of the hardest problems to solve in the operations research area. The GQAP addressed in this work is defined as the task of minimizing the assignment and transportation costs of…

Neural and Evolutionary Computing · Computer Science 2023-10-11 Mojtaba A. Farahani , Alan McKendall

Recently various optimization problems, such as Mixed Integer Linear Programming Problems (MILPs), have undergone comprehensive investigation, leveraging the capabilities of machine learning. This work focuses on learning-based solutions…

Machine Learning · Computer Science 2024-06-21 Zhentao Tan , Yadong Mu