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Recently, there has been great success in applying deep neural networks on graph structured data. Most work, however, focuses on either node- or graph-level supervised learning, such as node, link or graph classification or node-level…

Machine Learning · Computer Science 2021-12-15 Robin Winter , Frank Noé , Djork-Arné Clevert

Graph embedding is an effective method to represent graph data in a low dimensional space for graph analytics. Most existing embedding algorithms typically focus on preserving the topological structure or minimizing the reconstruction…

Machine Learning · Computer Science 2019-01-09 Shirui Pan , Ruiqi Hu , Guodong Long , Jing Jiang , Lina Yao , Chengqi Zhang

Node classification on graphs can be formulated as the Dirichlet problem on graphs where the signal is given at the labeled nodes, and the harmonic extension is done on the unlabeled nodes. This paper considers a time-dependent version of…

Machine Learning · Computer Science 2022-05-04 Amitoz Azad

Coding schemes with extremely low computational complexity are required for particular applications, such as wireless body area networks, in which case both very high data accuracy and very low power-consumption are required features. In…

Discrete Mathematics · Computer Science 2016-06-06 Eimear Byrne , Akiko Manada

Using graphs to model irregular information domains is an effective approach to deal with some of the intricacies of contemporary (network) data. A key aspect is how the data, represented as graph signals, depend on the topology of the…

Signal Processing · Electrical Eng. & Systems 2023-05-02 Fernando J. Iglesias Garcia , Santiago Segarra , Antonio G. Marques

Learning node embeddings that capture a node's position within the broader graph structure is crucial for many prediction tasks on graphs. However, existing Graph Neural Network (GNN) architectures have limited power in capturing the…

Machine Learning · Computer Science 2019-06-17 Jiaxuan You , Rex Ying , Jure Leskovec

Recent graph-to-text models generate text from graph-based data using either global or local aggregation to learn node representations. Global node encoding allows explicit communication between two distant nodes, thereby neglecting graph…

Computation and Language · Computer Science 2020-06-23 Leonardo F. R. Ribeiro , Yue Zhang , Claire Gardent , Iryna Gurevych

Conventional unsupervised hashing methods usually take advantage of similarity graphs, which are either pre-computed in the high-dimensional space or obtained from random anchor points. On the one hand, existing methods uncouple the…

Computer Vision and Pattern Recognition · Computer Science 2020-03-17 Yuming Shen , Jie Qin , Jiaxin Chen , Mengyang Yu , Li Liu , Fan Zhu , Fumin Shen , Ling Shao

Node embeddings act as the information interface for graph neural networks, yet their empirical impact is often reported under mismatched backbones, splits, and training budgets. This paper provides a controlled benchmark of embedding…

Machine Learning · Computer Science 2026-04-17 Nouhaila Innan , Antonello Rosato , Alberto Marchisio , Muhammad Shafique

Graph representation learning is to learn universal node representations that preserve both node attributes and structural information. The derived node representations can be used to serve various downstream tasks, such as node…

Machine Learning · Computer Science 2020-11-16 Yuxiang Ren , Bo Liu , Chao Huang , Peng Dai , Liefeng Bo , Jiawei Zhang

Learning accurate drug representations is essential for task such as computational drug repositioning. A drug hierarchy is a valuable source that encodes knowledge of relations among drugs in a tree-like structure where drugs that act on…

Biomolecules · Quantitative Biology 2022-08-15 Ke Yu , Shyam Visweswaran , Kayhan Batmanghelich

In order to perform network analysis tasks, representations that capture the most relevant information in the graph structure are needed. However, existing methods do not learn representations that can be interpreted in a straightforward…

Machine Learning · Computer Science 2021-01-05 Effrosyni Simou , Dorina Thanou , Pascal Frossard

Localization phenomena permeate many branches of physics playing a fundamental role on dynamical processes evolving on heterogeneous networks. These localization analyses are frequently grounded, for example, on eigenvectors of adjacency or…

Physics and Society · Physics 2020-11-24 Diogo H. Silva , Silvio C. Ferreira

We introduce an unsupervised graph embedding that trades off local node similarity and connectivity, and global structure. The embedding is based on a generalized graph Laplacian, whose eigenvectors compactly capture both network structure…

Machine Learning · Computer Science 2020-10-01 Shay Deutsch , Stefano Soatto

Designing effective positional encodings for graphs is key to building powerful graph transformers and enhancing message-passing graph neural networks. Although widespread, using Laplacian eigenvectors as positional encodings faces two…

Machine Learning · Computer Science 2024-06-11 Yinan Huang , William Lu , Joshua Robinson , Yu Yang , Muhan Zhang , Stefanie Jegelka , Pan Li

The Received Signal Strength based source localization can encounter severe problems originating from uncertain information about the anchor positions in practice. The anchor positions, although commonly assumed to be precisely known prior…

Information Theory · Computer Science 2016-12-30 Daniel Denkovski , Marko Angjelichinoski , Vladimir Atanasovski , Liljana Gavrilovska

Simplicial complexes can be viewed as high dimensional generalizations of graphs that explicitly encode multi-way ordered relations between vertices at different resolutions, all at once. This concept is central towards detection of higher…

Machine Learning · Computer Science 2022-07-05 Alexandros Dimitrios Keros , Vidit Nanda , Kartic Subr

Two main families of node feature augmentation schemes have been explored for enhancing GNNs: random features and spectral positional encoding. Surprisingly, however, there is still no clear understanding of the relation between these two…

Machine Learning · Computer Science 2023-07-20 Moshe Eliasof , Fabrizio Frasca , Beatrice Bevilacqua , Eran Treister , Gal Chechik , Haggai Maron

Embedding graph nodes into a vector space can allow the use of machine learning to e.g. predict node classes, but the study of node embedding algorithms is immature compared to the natural language processing field because of a diverse…

Machine Learning · Computer Science 2018-02-20 Kento Nozawa , Masanari Kimura , Atsunori Kanemura

Graph data is ubiquitous in the physical world, and it has always been a challenge to efficiently model graph structures using a unified paradigm for the understanding and reasoning on various graphs. Moreover, in the era of large language…

Artificial Intelligence · Computer Science 2023-12-19 Qihang Ai , Jianwu Zhou , Haiyun Jiang , Lemao Liu , Shuming Shi
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