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Adapting foundation models for specific purposes has become a standard approach to build machine learning systems for downstream applications. Yet, it is an open question which mechanisms take place during adaptation. Here we develop a new…

Computer Vision and Pattern Recognition · Computer Science 2025-03-24 Hyesu Lim , Jinho Choi , Jaegul Choo , Steffen Schneider

Photometric redshifts are estimated on the basis of template scenarios with the help of the code ZPEG, an extension of the galaxy evolution model PEGASE.2 and available on the PEGASE web site. The spectral energy distribution (SED)…

Astrophysics · Physics 2009-11-07 Damien Le Borgne , Brigitte Rocca-Volmerange

Latent diffusion models have established a new state-of-the-art in high-resolution visual generation. Integrating Vision Foundation Model priors improves generative efficiency, yet existing latent designs remain largely heuristic. These…

Computer Vision and Pattern Recognition · Computer Science 2026-03-13 Hangyu Liu , Jianyong Wang , Yutao Sun

Approximating distributions over complicated manifolds, such as natural images, are conceptually attractive. The deep latent variable model, trained using variational autoencoders and generative adversarial networks, is now a key technique…

Computer Vision and Pattern Recognition · Computer Science 2019-10-08 Wenju Xu , Shawn Keshmiri , Guanghui Wang

Purpose: Undersampling is used to reduce the scan time for high-resolution 3D magnetic resonance imaging. In order to achieve better image quality and avoid manual parameter tuning, we propose a probabilistic Bayesian approach to recover…

Image and Video Processing · Electrical Eng. & Systems 2022-10-20 Shuai Huang , James J. Lah , Jason W. Allen , Deqiang Qiu

Scientific archives now contain hundreds of petabytes of data across genomics, ecology, climate, and molecular biology that could reveal undiscovered patterns if systematically analyzed at scale. Large-scale, weakly-supervised datasets in…

Computer Vision and Pattern Recognition · Computer Science 2025-11-25 Samuel Stevens , Jacob Beattie , Tanya Berger-Wolf , Yu Su

Vision foundation models (FMs) achieve state-of-the-art performance in medical imaging. However, they encode information in abstract latent representations that clinicians cannot interrogate or verify. The goal of this study is to…

Computer Vision and Pattern Recognition · Computer Science 2026-03-26 Philipp Wesp , Robbie Holland , Vasiliki Sideri-Lampretsa , Sergios Gatidis

Sparse Autoencoders (SAEs) have emerged as a predominant tool in mechanistic interpretability, aiming to identify interpretable monosemantic features. However, how does sparse encoding organize the representations of activation vector from…

Machine Learning · Computer Science 2025-05-29 Wenjie Sun , Bingzhe Wu , Zhile Yang , Chengke Wu

Traditional spectral energy distribution (SED) fitting codes used to derive galaxy physical properties are often uncertain at the factor of a few level owing to uncertainties in galaxy star formation histories and dust attenuation curves.…

Astrophysics of Galaxies · Physics 2021-08-04 Sankalp Gilda , Sidney Lower , Desika Narayanan

Graph self-supervised learning seeks to learn effective graph representations without relying on labeled data. Among various approaches, graph autoencoders (GAEs) have gained significant attention for their efficiency and scalability.…

Machine Learning · Computer Science 2025-06-17 Yang Liu , Deyu Bo , Wenxuan Cao , Yuan Fang , Yawen Li , Chuan Shi

A recent line of work has shown promise in using sparse autoencoders (SAEs) to uncover interpretable features in neural network representations. However, the simple linear-nonlinear encoding mechanism in SAEs limits their ability to perform…

Machine Learning · Computer Science 2025-01-31 Charles O'Neill , Alim Gumran , David Klindt

Sparse autoencoders (SAEs) have been applied to large language models and protein language models, but not systematically to electronic health record (EHR) foundation models. We train TopK SAEs on FlatASCEND, a 14.5-million-parameter…

Machine Learning · Computer Science 2026-05-07 Chris Sainsbury , Feng Dong , Andreas Karwath

Variational Autoencoders (VAEs) typically rely on a probabilistic decoder with a predefined likelihood, most commonly an isotropic Gaussian, to model the data conditional on latent variables. While convenient for optimization, this choice…

Machine Learning · Statistics 2025-04-29 Chen Xu , Qiang Wang , Lijun Sun

High resolution galaxy spectra contain much information about galactic physics, but the high dimensionality of these spectra makes it difficult to fully utilize the information they contain. We apply variational autoencoders (VAEs), a…

Instrumentation and Methods for Astrophysics · Physics 2020-07-13 Stephen K. N. Portillo , John K. Parejko , Jorge R. Vergara , Andrew J. Connolly

We seek to improve the accuracy of joint galaxy photometric redshift estimation and spectral energy distribution (SED) fitting. By simulating different sources of uncorrected systematic errors, we demonstrate that if the uncertainties on…

Instrumentation and Methods for Astrophysics · Physics 2015-06-24 Viviana Acquaviva , Anand Raichoor , Eric Gawiser

This article investigates the problem of estimating stellar atmospheric parameters from spectra. Feature extraction is a key procedure in estimating stellar parameters automatically. We propose a scheme for spectral feature extraction and…

Instrumentation and Methods for Astrophysics · Physics 2015-08-04 Tan Yang , Xiangru Li

In this paper, we study the diffusability (learnability) of variational autoencoders (VAE) in latent diffusion. First, we show that pixel-space diffusion trained with an MSE objective is inherently biased toward learning low and mid spatial…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Mang Ning , Mingxiao Li , Le Zhang , Lanmiao Liu , Matthew B. Blaschko , Albert Ali Salah , Itir Onal Ertugrul

Sparse Autoencoders (SAEs) are an interpretability technique aimed at decomposing neural network activations into interpretable units. However, a major bottleneck for SAE development has been the lack of high-quality performance metrics,…

Machine Learning · Computer Science 2024-12-02 Adam Karvonen , Can Rager , Samuel Marks , Neel Nanda

We present an unsupervised outlier detection method for galaxy spectra based on the spectrum autoencoder architecture spender, which reliably captures spectral features and provides highly realistic reconstructions for SDSS galaxy spectra.…

Instrumentation and Methods for Astrophysics · Physics 2023-08-02 Yan Liang , Peter Melchior , Sicong Lu , Andy Goulding , Charlotte Ward

With the increasing use of high-precision system analysis programs in nuclear engineering, the number of high-fidelity computational data for accident simulation is exploding. Therefore, an algorithm that can achieve both automatic…

Signal Processing · Electrical Eng. & Systems 2022-08-30 Chengyuan Li , Meifu Li , Zhifang Qiu