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The dynamics of two competing species in a finite size community is one of the most studied problems in population genetics and community ecology. Stochastic fluctuations lead, inevitably, to the extinction of one of the species, but the…

Populations and Evolution · Quantitative Biology 2016-11-30 Matan Danino , David A. Kessler , Nadav M. Shnerb

We present a new stochastic model, based on a 0-dimensional version of the well known biogeochemical flux model (BFM), which allows to take into account the temperature random fluctuations present in natural systems and therefore to…

Statistical Mechanics · Physics 2021-12-20 Paolo Lazzari , Roberto Grimaudo , Cosimo Solidoro , Davide Valenti

Assembly theory predicts that a distinguishing signature of life is its ability to produce complex molecules in abundance, opening new possibilities for life detection. Experimental validation of this approach has so far relied on abiotic…

Biological Physics · Physics 2025-09-08 Alexandre Champagne-Ruel , Christopher P. Kempes , Cole Mathis

Stochasticity is a defining feature of the pairwise forces governing interactions in biological systems-from molecular motors to cell-cell adhesion-yet its consequences on large-scale dynamics remain poorly understood. Here, we show that…

Soft Condensed Matter · Physics 2025-08-27 Henry Alston , Raphael Voituriez , Thibault Bertrand

The emergence of macroscopic order and patterns is a central paradigm in systems of (self-)propelled agents, and a key component in the structuring of many biological systems.The relationships between the ordering process and the underlying…

Soft Condensed Matter · Physics 2020-12-02 Jonas Denk , Erwin Frey

Ecological systems show a variety of characteristic patterns of biodiversity in space and time. It is a challenge for theory to find models that can reproduce and explain the observed patterns. Since the advent of island biogeography these…

Populations and Evolution · Quantitative Biology 2019-10-21 Michaela Hamm , Barbara Drossel

Pattern formation often occurs in spatially extended physical, biological and chemical systems due to an instability of the homogeneous steady state. The type of the instability usually prescribes the resulting spatio-temporal patterns and…

Pattern Formation and Solitons · Physics 2015-04-14 David Schueler , Sergio Alonso , Alessandro Torcini , Markus Baer

The problem of synchronization of coupled Hamiltonian systems exhibits interesting features due to the non-uniform or mixed nature (regular and chaotic) of the phase space. We study these features by investigating the synchronization of…

Chaotic Dynamics · Physics 2017-05-26 Swetamber Das , Sasibhusan Mahata , Neelima Gupte

Synchronization is studied in a spatially-distributed network of weekly-coupled, excitatory neurons of Hodgkin-Huxley type. All neurons are coupled to each other synaptically with a fixed time delay and a coupling strength inversely…

Soft Condensed Matter · Physics 2007-05-23 Yuqing Wang , Z. D. Wang , Y. -X. Li , X. Pei

Network structure or connectivity pattern is critical in determining collective dynamics among interacting species in ecosystems. Conventional research on species persistence in spatial populations has focused on static network structure,…

Populations and Evolution · Quantitative Biology 2022-08-10 Subhendu Bhandary , Debabrata Biswas , Tanmoy Banerjee , Partha Sharathi Dutta

Synchronization is the spontaneous alignment of the dynamics of weakly-coupled oscillators. In addition to temporal dynamics like periodic and chaotic oscillations, also the spatio-temporal dynamics of spatially-extended systems like…

Optics · Physics 2026-03-11 Jules Mercadier , Stefan Bittner , Marc Sciamanna

Previously, we developed a population model incorporating the Allee effect and periodic environmental fluctuations, in which organisms alternate between nomadic and colonial behaviours. This switching strategy is regulated by biological…

Populations and Evolution · Quantitative Biology 2018-01-24 Jin Ming Koh , Kang Hao Cheong

Explaining the emergence of self-organized biodiversity and species abundance distribution patterns remians a fundamental challenge in ecology. While classical frameworks, such as neutral theory and models based on pairwise species…

Populations and Evolution · Quantitative Biology 2025-10-29 Ju Kang , Yiyuan Niu , Yuanzhi Li , Chengjin Chu

The synchronization of coupled chaotic systems represents a fundamental example of self organization and collective behavior. This well-studied phenomenon is classically characterized in terms of macroscopic parameters, such as Lyapunov…

Recent massive numerical simulations have shown that the response of a "stochastic resonator" is enhanced as a consequence of spatial coupling. Similar results have been analytically obtained in a reaction-diffusion model, using…

Statistical Mechanics · Physics 2015-11-30 B. von Haeften , R. Deza , H. S. Wio

A diffusion-type coupling operator biologically significant in neuroscience is a difference of Gaussian functions (Mexican Hat operator) used as a spatial-convolution kernel. We are interested in pattern formation by \emph{stochastic}…

Neurons and Cognition · Quantitative Biology 2019-10-02 Peter H. Baxendale , Priscilla E. Greenwood , Lawrence M. Ward

The abundance of a species' population in an ecosystem is rarely stationary, often exhibiting large fluctuations over time. Using historical data on marine species, we show that the year-to-year fluctuations of population growth rate obey a…

Adaptation and Self-Organizing Systems · Physics 2015-06-02 Jie Sun , Sean P. Cornelius , John Janssen , Kimberly A. Gray , Adilson E. Motter

Chaotic multiscale dynamical systems are common in many areas of science, one of the examples being the interaction of the low-frequency dynamics in the atmosphere with the fast turbulent weather dynamics. One of the key questions about…

Dynamical Systems · Mathematics 2016-04-08 Rafail V. Abramov

Spatiotemporal chaotic systems are difficult to characterize in a model-free manner because of their high dimensionality, strong nonlinearity, and sensitivity to initial conditions. Coupled map lattices, as a representative class of…

Chaotic Dynamics · Physics 2026-04-15 Xiaoqi Lei , Zixiang Yan , Jian Gao , Yueheng Lan , Jinghua Xiao

In this letter, we report a numerical study on the collective dynamics of two mutually coupled Thomas oscillators with linear/nonlinear coupling in a dynamic environment. We claim our model calculations can explain the diffusion of…

Chaotic Dynamics · Physics 2022-07-13 Vinesh Vijayan , Biplab Ganguli
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