Related papers: Markov State--Space Modeling and Channel Character…
A communication setup is considered where a transmitter wishes to simultaneously sense its channel state and convey a message to a receiver. The state is estimated at the transmitter by means of generalized feedback, i.e. a strictly causal…
Molecular communication (MC) can enable the transfer of information between nanomachines using molecules as the information carrier. In MC systems, multiple receiver nanomachines often co-exist in the same communication channel to serve…
We study the internal resonance, energy transfer, activation mechanism, and control of a model of DNA division via parametric resonance. While the system is robust to noise, this study shows that it is sensitive to specific fine scale modes…
Recently, molecular communication (MC) has been studied as a micro-scale communication between cells or molecular robots. In previous works, the MC channels in unbounded environment was analyzed. However, many of the experimentally…
We propose an in silico molecular associative memory model for pattern learning, storage and denoising using Pairwise Markov Random Field (PMRF) model. Our PMRF-based molecular associative memory model extracts locally distributed features…
A novel nonlinear model predictive control approach for state signal shaping is proposed. The control strategy introduces a residual shape cost kernel based on the dynamics of circular limit cycles from a supercritical Neimark-Sacker…
Markov state models (MSMs) are a powerful tool to analyze and coarse-grain complex dynamical data into interpretable kinetic processes. This capability is particularly important in heterogeneous catalysis, where a medley of reactants and…
We investigate a remote estimation problem in which a transmitter observes a Markov source and chooses the power level to transmit it over a time-varying packet-drop channel. The channel is modeled as a channel with Markovian state where…
We propose a new statistical mechanics model for the melting transition of DNA. Base pairing and stacking are treated as separate degrees of freedom, and the interplay between pairing and stacking is described by a set of local rules which…
Exponential increase of data has motivated advances of data storage technologies. As a promising storage media, DeoxyriboNucleic Acid (DNA) storage provides a much higher data density and superior durability, compared with state-of-the-art…
Molecular Communications (MC) is a bio-inspired communication paradigm that uses molecules as information carriers, requiring unconventional transceivers and modulation/detection techniques. Practical MC receivers (MC-Rxs) can be…
In diffusion-based molecular communications, messages can be conveyed via the variation in the concentration of molecules in the medium. In this paper, we intend to analyze the achievable capacity in transmission of information from one…
A molecular communication channel is determined by the received signal. Received signal models form the basis for studies focused on modulation, receiver design, capacity, and coding depend on the received signal models. Therefore, it is…
Synaptic communication is based on a biological Molecular Communication (MC) system which may serve as a blueprint for the design of synthetic MC systems. However, the physical modeling of synaptic MC is complicated by the possible…
In many biochemical processes, proteins bound to DNA at distant sites are brought into close proximity by loops in the underlying DNA. For example, the function of some gene-regulatory proteins depends on such DNA looping interactions. We…
In this paper, we propose a model for large scale fading channels via markov process. We exploit the channel delay profile and the dependency between channel states via a first order autoregressive model that cast insight to the channel…
Knowing how to reliably use memristors as information storage devices is crucial not only to their role as emerging memories, but also for their application in neural network acceleration and as components of novel neuromorphic systems. In…
In this paper, we consider diffusive molecular communication (MC) systems affected by signal-dependent diffusive noise, inter-symbol interference, and external noise. We design linear and nonlinear fractionally-spaced equalization schemes…
A memoryless state-dependent broadcast channel (BC) is considered, where the transmitter wishes to convey two private messages to two receivers while simultaneously estimating the respective states via generalized feedback. The model at…
This work presents a performance analysis for diffusive molecular communication with mobile transmit and receive nanomachines. To begin with, the optimal test is obtained for symbol detection at the receiver nanomachine. Subsequently,…