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The area of geometry with its very strong and appealing visual contents and its also strong and appealing connection between the visual content and its formal specification, is an area where computational tools can enhance, in a significant…

Computational Geometry · Computer Science 2012-02-23 Vanda Santos , Pedro Quaresma

A large number of computational scientific research projects make use of open source software packages. However, the development process of such tools frequently differs from conventional software development; partly because of the nature…

Software Engineering · Computer Science 2013-09-24 Ivan Girotto , Axel Kohlmeyer , David Grellscheid , Shawn T. Brown

PolyMAPS is an open-source library that helps researchers to initialize LAMMPS molecular dynamics simulations. It introduces an integrated workflow by combining preparation, launching, visualization, and analysis into a single Jupyter…

Chemical Physics · Physics 2023-11-14 Xiaoli Yan , Santanu Chaudhuri

Algorithms that create recommendations based on observed data have significant commercial value for online retailers and many other industries. Recommender systems have a significant research community, and studying such systems is part of…

Information Retrieval · Computer Science 2022-05-26 Michael Hahsler

Modern software systems require various capabilities to meet architectural and operational demands, such as the ability to scale automatically and recover from sudden failures. Self-adaptive software systems have emerged as a critical focus…

Software Engineering · Computer Science 2025-04-16 Mingyang Xu , Ryan Zheng He Liu , Mark Stoodley , Ladan Tahvildari

Monte Carlo (MC) simulations are powerful computational tools for investigating thermodynamic behavior and validating analytical approaches in complex physical systems. Here we present ETHER (Efficient Tool for THermodynamics Exploration…

Strongly Correlated Electrons · Physics 2026-03-10 Mukesh Kumar Sharma

With the interactivity and multiple representation features, computer simulations lend itself to the guided inquiry learning. However, these simulations are usually designed for post-elementary students. Thus, the aim of this study is to…

Physics Education · Physics 2012-12-03 Sze Yee Lye , Loo Kang Wee

In this work we release our extensible and easily configurable neural network training software. It provides a rich set of functional layers with a particular focus on efficient training of recurrent neural network topologies on multiple…

Machine Learning · Computer Science 2017-01-11 Patrick Doetsch , Albert Zeyer , Paul Voigtlaender , Ilya Kulikov , Ralf Schlüter , Hermann Ney

We present the first open-source, GPU-based code for complex plasmas. The code, OpenDust, aims to provide researchers both experimenters and theorists user-friendly and high-performance tool for self-consistent calculation forces, acting on…

Plasma Physics · Physics 2023-05-03 D. Kolotinskii , A. Timofeev

Virtual learning environments are a useful modality for engaging students in the classroom by affording them a sense of presence and immersion. The motivation of this project was to create an open-source augmented reality electrical circuit…

Human-Computer Interaction · Computer Science 2019-08-07 Dana Conard , Blake Vollmer , Corbin Shatto , Hannah Bowman , Sara Kassis

ARES OS 2.0 (hereinafter ARES OS) is an open-source software suite to enable laboratory automation and closed-loop autonomous experimentation. Its function is to orchestrate experimental actions and data handoff between lab equipment,…

Computational Engineering, Finance, and Science · Computer Science 2026-04-07 Arthur W. N. Sloan , Robert W. Waelder , Morgen L. Smith , Nicholas Kleiner , Arnas Babeckis , Jason Wheeler , Daylond Hooper , Benji Maruyama

Time series prediction (TSP) has been widely used in various fields, such as life sciences and finance, to forecast future trends based on historical data. However, to date, there has been relatively little research conducted on the TSP for…

Quantum Physics · Physics 2024-01-15 Zhao-Wei Wang , Zhao-Ming Wang

Efficiently utilizing procured power and optimizing performance of scientific applications under power and energy constraints are challenging. The HPC PowerStack defines a software stack to manage power and energy of high-performance…

This review presents how R, the popular statistical environment and programming language, can be used in the frame of proteomics data analysis. A short introduction to R is given, with special emphasis on some of the features that make R…

Genomics · Quantitative Biology 2014-01-14 Laurent Gatto , Andy Christoforou

Energy research software (ERS) is a central cornerstone to facilitate energy research. However, ERS is developed by researchers who, in many cases, lack formal training in software engineering. This reduces the quality of ERS, leading to…

Software Engineering · Computer Science 2025-07-25 Stephan Ferenz , Emilie Frost , Rico Schrage , Thomas Wolgast , Inga Beyers , Oliver Karras , Oliver Werth , Astrid Nieße

Open Source Software (OSS) has been widely used in the educational environment largely due to its reduced cost of ownership. While OSS has evolved over the years, challenges exist in its implementation and wide adoption. Foremost among…

Computers and Society · Computer Science 2019-01-04 Ryan Ebardo

Simulation has emerged as a popular method to study the long-term societal consequences of recommender systems. This approach allows researchers to specify their theoretical model explicitly and observe the evolution of system-level…

Computers and Society · Computer Science 2021-07-29 Eli Lucherini , Matthew Sun , Amy Winecoff , Arvind Narayanan

Reinforcement learning (RL) agents show great promise in solving sequential decision-making tasks. However, validating the reliability and performance of the agent policies' behavior for deployment remains challenging. Most reinforcement…

Software Engineering · Computer Science 2025-09-01 Jørn Eirik Betten , Quentin Mazouni , Dennis Gross , Pedro Lind , Helge Spieker

One of the most challenging goals in designing intelligent systems is empowering them with the ability to synthesize programs from data. Namely, given specific requirements in the form of input/output pairs, the goal is to train a machine…

Programming Languages · Computer Science 2021-10-18 Giovanni De Toni , Luca Erculiani , Andrea Passerini

A/B experiments are commonly used in research to compare the effects of changing one or more variables in two different experimental groups - a control group and a treatment group. While the benefits of using A/B experiments are widely…

Software Engineering · Computer Science 2023-09-26 Andrew Hornback , Sungeun An , Scott Bunin , Stephen Buckley , John Kos , Ashok Goel