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The interplay between the topological and geometrical properties of a polymer ring can be clarified by establishing the entanglement trapped in any portion (arc) of the ring. The task requires to close the open arcs into a ring, and the…

Soft Condensed Matter · Physics 2015-05-27 Luca Tubiana , Enzo Orlandini , Cristian Micheletti

In this paper we investigate the relationship between isotopy classes of knots and links in S^3 and the diffeomorphism types of homeomorphic smooth 4-manifolds. As a corollary of this initial investigation, we begin to uncover the…

dg-ga · Mathematics 2008-02-03 Ronald Fintushel , Ronald J. Stern

Knot theory is the Mathematical study of knots. In this paper we have studied the Composition of two knots. Knot theory belongs to Mathematical field of Topology, where the topological concepts such as topological spaces, homeomorphisms,…

Geometric Topology · Mathematics 2023-07-04 G Infant Gabriel , Dr N Uma

Garoufalidis conjectured a relation between the boundary slopes of a knot and its colored Jones polynomials. According to the conjecture, certain boundary slopes are detected by the sequence of degrees of the colored Jones polynomials. We…

Geometric Topology · Mathematics 2011-05-20 David Futer , Efstratia Kalfagianni , Jessica S. Purcell

We present a systematic classification of uncolored bonded knots with singularity number at most seven. Bonded knots provide a topological model for closed protein chains with intramolecular bridges, such as disulfide bonds. Following the…

Geometric Topology · Mathematics 2026-03-20 Boštjan Gabrovšek , Matic Simonič , Wanda Niemyska

In this paper we study how randomly generated knots occupy a volume of space using topological methods. To this end, we consider the evolution of the first homology of an immersed metric neighbourhood of a knot's embedding for growing…

Geometric Topology · Mathematics 2021-08-09 Daniele Celoria , Barbara I. Mahler

The relationship of friends in social networks can be strong or weak. Some research works have shown that a close relationship between friends conducts good community structure. Based on this result, we propose an effective method in…

Social and Information Networks · Computer Science 2017-11-01 Xiaoping Fan , Zhijie Chen , Fei Cai , Jinsong Wu , Shengzong Liu , Zhining Liao , Zhifang Liao

The paper introduces Slope Conjecture which relates the degree of the Jones polynomial of a knot and its parallels with the slopes of incompressible surfaces in the knot complement. More precisely, we introduce two knot invariants, the…

Geometric Topology · Mathematics 2010-05-26 Stavros Garoufalidis

Knots are familiar entities that appear at a captivating nexus of art, technology, mathematics, and science. As topologically stable objects within field theories, they have been speculatively proposed as explanations for diverse persistent…

A knot is an an embedding of a circle into three-dimensional space. We say that a knot is unknotted if there is an ambient isotopy of the embedding to a standard circle. By representing knots via planar diagrams, we discuss the problem of…

Geometric Topology · Mathematics 2011-11-08 Allison Henrich , Louis H. Kauffman

This paper explores the problem of unknotting closed braids and classical knots in mathematical knot theory. We apply evolutionary computation methods to learn sequences of moves that simplify knot diagrams, and show that this can be…

Geometric Topology · Mathematics 2013-02-05 Nicholas Jackson , Colin G. Johnson

We consider the problem of searching for a node on a labelled random graph according to a greedy algorithm that selects a route to the desired node using metric information on the graph. Motivated by peer-to-peer networks two types of…

Statistical Mechanics · Physics 2013-05-29 David Lancaster

We use the Chebyshev knot diagram model of Koseleff and Pecker in order to introduce a random knot diagram model by assigning the crossings to be positive or negative uniformly at random. We give a formula for the probability of choosing a…

Geometric Topology · Mathematics 2015-08-14 Moshe Cohen , Sunder Ram Krishnan

RNA molecules are known to form complex secondary structures including pseudoknots. A systematic framework for the enumeration, classification and prediction of secondary structures is critical to determine the biological significance of…

Biomolecules · Quantitative Biology 2025-12-24 Rayan Ibrahim , Allison H. Moore

We introduce and study knots and links in 2-dimensional complexes. In particular, we define linking numbers for oriented two-component links in 2-complexes and a Kauffman-type bracket polynomial for links in 2-complexes. We also discuss…

Geometric Topology · Mathematics 2023-06-13 Vladimir Turaev

We define homotopy-theoretic invariants of knots in prime 3-manifolds. Fix a knot J in a prime 3-manifold M. Call a knot K in M concordant to J if it cobounds a properly embedded annulus with J in MxI, and call K J-characteristic if there…

Geometric Topology · Mathematics 2011-11-01 Prudence Heck

This manuscript introduces a new framework for the study of knots by exploring the neighborhood of knot embeddings in the space of simple open and closed curves in 3-space. The latter gives rise to a knotoid spectrum, which determines the…

Geometric Topology · Mathematics 2024-10-22 Eleni Panagiotou

We resolve a case of the oriented knot complement conjecture by showing that knots in an orientable circle bundle $N$ over a genus $g \geq 2$ surface $S$ are determined by their complements. We apply this to the setting of canonical knots…

Geometric Topology · Mathematics 2024-01-08 Tommaso Cremaschi , Andrew Yarmola

We describe a normal surface algorithm that decides whether a knot, with known degree of the colored Jones polynomial, satisfies the Strong Slope Conjecture. We also discuss possible simplifications of our algorithm and state related open…

Geometric Topology · Mathematics 2018-03-26 Efstratia Kalfagianni , Christine Ruey Shan Lee

Long, flexible physical filaments are naturally tangled and knotted, from macroscopic string down to long-chain molecules. The existence of knotting in a filament naturally affects its configuration and properties, and may be very stable or…

Biomolecules · Quantitative Biology 2016-11-21 Keith Alexander , Alexander J Taylor , Mark R Dennis