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Accurate segmentation of vascular networks from sparse CT scan slices remains a significant challenge in medical imaging, particularly due to the thin, branching nature of vessels and the inherent sparsity between imaging planes. Existing…

Image and Video Processing · Electrical Eng. & Systems 2025-06-23 Salvatore Esposito , Daniel Rebain , Arno Onken , Changjian Li , Oisin Mac Aodha

On the medical images, many of the tissues/lesions may be ambiguous. That is why the medical segmentation is typically annotated by a group of clinical experts to mitigate the personal bias. However, this clinical routine also brings new…

Image and Video Processing · Electrical Eng. & Systems 2022-08-08 Junde Wu , Huihui Fang , Hoayi Xiong , Lixin Duan , Mingkui Tan , Weihua Yang , Huiying Liu , Yanwu Xu

We present a new instance segmentation approach tailored to biological images, where instances may correspond to individual cells, organisms or plant parts. Unlike instance segmentation for user photographs or road scenes, in biological…

Computer Vision and Pattern Recognition · Computer Science 2020-04-24 Victor Kulikov , Victor Lempitsky

Instance segmentation is of great importance for many biological applications, such as study of neural cell interactions, plant phenotyping, and quantitatively measuring how cells react to drug treatment. In this paper, we propose a novel…

Computer Vision and Pattern Recognition · Computer Science 2021-06-15 Jingru Yi , Pengxiang Wu , Hui Tang , Bo Liu , Qiaoying Huang , Hui Qu , Lianyi Han , Wei Fan , Daniel J. Hoeppner , Dimitris N. Metaxas

Detecting and segmenting object instances is a common task in biomedical applications. Examples range from detecting lesions on functional magnetic resonance images, to the detection of tumours in histopathological images and extracting…

Computer Vision and Pattern Recognition · Computer Science 2021-04-12 Tim Prangemeier , Christoph Reich , Heinz Koeppl

Foundation models such as the recently introduced Segment Anything Model (SAM) have achieved remarkable results in image segmentation tasks. However, these models typically require user interaction through handcrafted prompts such as…

Computer Vision and Pattern Recognition · Computer Science 2024-10-01 Mélanie Gaillochet , Christian Desrosiers , Hervé Lombaert

Image segmentation foundation models (SFMs) like Segment Anything Model (SAM) have achieved impressive zero-shot and interactive segmentation across diverse domains. However, they struggle to segment objects with certain structures,…

Computer Vision and Pattern Recognition · Computer Science 2025-11-17 Yixin Zhang , Nicholas Konz , Kevin Kramer , Maciej A. Mazurowski

Cell boundary information is crucial for analyzing cell behaviors from time-lapse microscopy videos. Existing supervised cell segmentation tools, such as ImageJ, require tuning various parameters and rely on restrictive assumptions about…

Applications · Statistics 2026-01-27 Laura Baracaldo , Blythe King , Haoran Yan , Yizi Lin , Nina Miolane , Mengyang Gu

Wound care is often challenged by the economic and logistical burdens that consistently afflict patients and hospitals worldwide. In recent decades, healthcare professionals have sought support from computer vision and machine learning…

Computer Vision and Pattern Recognition · Computer Science 2026-01-26 Remi Chierchia , Léo Lebrat , David Ahmedt-Aristizabal , Yulia Arzhaeva , Olivier Salvado , Clinton Fookes , Rodrigo Santa Cruz

Medical image segmentation remains challenging in low-data regimes, where scarce annotations often yield poor generalization and ambiguous boundaries with missing fine structures. Recent self-supervised pretraining has improved…

Computer Vision and Pattern Recognition · Computer Science 2026-05-15 Zhiquan Chen , Haitao Wang , Guowei Zou , Hejun Wu

Medical image segmentation poses challenges due to domain gaps, data modality variations, and dependency on domain knowledge or experts, especially for low- and middle-income countries (LMICs). Whereas for humans, given a few exemplars…

Computer Vision and Pattern Recognition · Computer Science 2024-10-28 Chen Xu , Qiming Huang , Yuqi Hou , Jiangxing Wu , Fan Zhang , Hyung Jin Chang , Jianbo Jiao

Existing multi-focus image fusion (MFIF) methods often fail to preserve the uncertain transition region and detect small focus areas within large defocused regions accurately. To address this issue, this study proposes a new…

Computer Vision and Pattern Recognition · Computer Science 2024-02-01 Xilai Li , Xiaosong Li , Haishu Tan , Jinyang Li

As a fundamental task in computer vision, semantic segmentation is widely applied in fields such as autonomous driving, remote sensing image analysis, and medical image processing. In recent years, Transformer-based segmentation methods…

Computer Vision and Pattern Recognition · Computer Science 2025-03-31 Tai An , Weiqiang Huang , Da Xu , Qingyuan He , Jiacheng Hu , Yujia Lou

Deep learning models trained with large amounts of data have become a recent and effective approach to predictive problem solving -- these have become known as "foundation models" as they can be used as fundamental tools for other…

Image and Video Processing · Electrical Eng. & Systems 2024-05-17 José Guilherme de Almeida , Nuno M. Rodrigues , Sara Silva , Nickolas Papanikolaou

Recently, Segment Anything Model (SAM) has demonstrated strong generalizability in various instance segmentation tasks. However, its performance is severely dependent on the quality of manual prompts. In addition, the RGB images that…

Computer Vision and Pattern Recognition · Computer Science 2026-02-09 Yihan Shang , Wei Wang , Chao Huang , Xinghui Dong

Recent breakthroughs in large foundation models have enabled the possibility of transferring knowledge pre-trained on vast datasets to domains with limited data availability. Agriculture is one of the domains that lacks sufficient data.…

Computer Vision and Pattern Recognition · Computer Science 2026-03-24 Yanan Wang , Zhenghao Fei , Ruichen Li , Yibin Ying

Accurate and real-time surgical instrument segmentation is important in the endoscopic vision of robot-assisted surgery, and significant challenges are posed by frequent instrument-tissue contacts and continuous change of observation…

Computer Vision and Pattern Recognition · Computer Science 2020-08-12 Fangbo Qin , Shan Lin , Yangming Li , Randall A. Bly , Kris S. Moe , Blake Hannaford

From a geometric perspective most nonlinear binary classification algorithms, including state of the art versions of Support Vector Machine (SVM) and Radial Basis Function Network (RBFN) classifiers, and are based on the idea of…

Machine Learning · Computer Science 2007-05-23 Erik M. Boczko , Todd R. Young

Despite recent advances in data-independent and deep-learning algorithms, unstained live adherent cell instance segmentation remains a long-standing challenge in cell image processing. Adherent cells' inherent visual characteristics, such…

Computer Vision and Pattern Recognition · Computer Science 2023-01-30 Fei Pan , Yutong Wu , Kangning Cui , Shuxun Chen , Yanfang Li , Yaofang Liu , Adnan Shakoor , Han Zhao , Beijia Lu , Shaohua Zhi , Raymond Chan , Dong Sun

Automated nodule segmentation is essential for computer-assisted diagnosis in ultrasound images. Nevertheless, most existing methods depend on precise pixel-level annotations by medical professionals, a process that is both costly and…

Computer Vision and Pattern Recognition · Computer Science 2024-07-19 Xingyue Zhao , Peiqi Li , Xiangde Luo , Meng Yang , Shi Chang , Zhongyu Li