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Related papers: DMMRL: Disentangled Multi-Modal Representation Lea…

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Current autoencoder-based disentangled representation learning methods achieve disentanglement by penalizing the (aggregate) posterior to encourage statistical independence of the latent factors. This approach introduces a trade-off between…

Disentangled Representation Learning aims to improve the explainability of deep learning methods by training a data encoder that identifies semantically meaningful latent variables in the data generation process. Nevertheless, there is no…

Machine Learning · Computer Science 2024-10-08 Ruoyu Wang , Lina Yao

The precise prediction of molecular properties is essential for advancements in drug development, particularly in virtual screening and compound optimization. The recent introduction of numerous deep learning-based methods has shown…

Machine Learning · Computer Science 2024-07-01 Taojie Kuang , Pengfei Liu , Zhixiang Ren

Disentanglement is a difficult property to enforce in neural representations. This might be due, in part, to a formalization of the disentanglement problem that focuses too heavily on separating relevant factors of variation of the data in…

Machine Learning · Computer Science 2022-05-23 Andrea Valenti , Davide Bacciu

Understanding how chemical perturbations propagate through biological systems is essential for robust molecular property prediction. While most existing methods focus on chemical structures alone, recent advances highlight the crucial role…

Machine Learning · Computer Science 2025-11-27 Mengran Li , Zelin Zang , Wenbin Xing , Junzhou Chen , Ronghui Zhang , Jiebo Luo , Stan Z. Li

Encoding the electronic structure of molecules using 2-electron reduced density matrices (2RDMs) as opposed to many-body wave functions has been a decades-long quest as the 2RDM contains sufficient information to compute the exact molecular…

Chemical Physics · Physics 2022-08-11 David Pekker , Chungwen Liang , Sankha Pattanayak , Swagatam Mukhopadhyay

Deep representation learning offers a powerful paradigm for mapping input data onto an organized embedding space and is useful for many music information retrieval tasks. Two central methods for representation learning include deep metric…

Sound · Computer Science 2020-08-14 Jongpil Lee , Nicholas J. Bryan , Justin Salamon , Zeyu Jin , Juhan Nam

Disentangling the encodings of neural models is a fundamental aspect for improving interpretability, semantic control and downstream task performance in Natural Language Processing. Currently, most disentanglement methods are unsupervised…

Computation and Language · Computer Science 2023-02-17 Danilo S. Carvalho , Giangiacomo Mercatali , Yingji Zhang , Andre Freitas

Accurate and efficient prediction of polymer properties is of key importance for polymer design. Traditional experimental tools and density function theory (DFT)-based simulations for polymer property evaluation, are both expensive and…

Materials Science · Physics 2024-10-08 Cong Shen , Yipeng Zhang , Fei Han , Kelin Xia

In deep metric learning (DML), high-level input data are represented in a lower-level representation (embedding) space, such that samples from the same class are mapped close together, while samples from disparate classes are mapped further…

Computer Vision and Pattern Recognition · Computer Science 2023-04-03 Ryan Furlong , Vincent O'Brien , James Garland , Daniel Palacios-Alonso , Francisco Dominguez-Mateos

Histopathology remains the gold standard for cancer diagnosis and prognosis. With the advent of transcriptome profiling, multi-modal learning combining transcriptomics with histology offers more comprehensive information. However, existing…

Image and Video Processing · Electrical Eng. & Systems 2026-03-03 Yupei Zhang , Xiaofei Wang , Anran Liu , Lequan Yu , Chao Li

This paper presents a novel approach that leverages domain variability to learn representations that are conditionally invariant to unwanted variability or distractors. Our approach identifies both spurious and invariant latent features…

Machine Learning · Computer Science 2023-07-04 Hananeh Aliee , Ferdinand Kapl , Soroor Hediyeh-Zadeh , Fabian J. Theis

Machine learning-driven methods for property prediction have been of deep interest. However, much work remains to be done to improve the generalization ability, accuracy, and inference time for critical applications. The traditional machine…

Quantitative Methods · Quantitative Biology 2024-10-08 Kanad Sen , Saksham Gupta , Abhishek Raj , Alankar Alankar

Disentangled representation learning remains challenging as the underlying factors of variation in the data do not naturally exist. The inherent complexity of real-world data makes it unfeasible to exhaustively enumerate and encapsulate all…

Computation and Language · Computer Science 2024-02-13 Jiawei Zhou , Xiaoguang Li , Lifeng Shang , Xin Jiang , Qun Liu , Lei Chen

Molecular Property Prediction (MPP) plays a pivotal role across diverse domains, spanning drug discovery, material science, and environmental chemistry. Fueled by the exponential growth of chemical data and the evolution of artificial…

Machine Learning · Computer Science 2024-08-23 Tanya Liyaqat , Tanvir Ahmad , Chandni Saxena

Learning disentangled representations from visual data, where different high-level generative factors are independently encoded, is of importance for many computer vision tasks. Solving this problem, however, typically requires to…

Computer Vision and Pattern Recognition · Computer Science 2019-01-25 Adria Ruiz , Oriol Martinez , Xavier Binefa , Jakob Verbeek

Machine learning in drug discovery has been focused on virtual screening of molecular libraries using discriminative models. Generative models are an entirely different approach that learn to represent and optimize molecules in a continuous…

Quantitative Methods · Quantitative Biology 2020-11-17 Matthew Ragoza , Tomohide Masuda , David Ryan Koes

Cross-modal learning has become a fundamental paradigm for integrating heterogeneous information sources such as images, text, and structured attributes. However, multimodal representations often suffer from modality dominance, redundant…

Computer Vision and Pattern Recognition · Computer Science 2025-12-09 Xuecheng Li , Weikuan Jia , Alisher Kurbonaliev , Qurbonaliev Alisher , Khudzhamkulov Rustam , Ismoilov Shuhratjon , Eshmatov Javhariddin , Yuanjie Zheng

Prototype-based methods are of the particular interest for domain specialists and practitioners as they summarize a dataset by a small set of representatives. Therefore, in a classification setting, interpretability of the prototypes is as…

Machine Learning · Computer Science 2019-11-12 Babak Hosseini , Barbara Hammer

Accurate molecular property prediction is a critical challenge with wide-ranging applications in chemistry, materials science, and drug discovery. Molecular representation methods, including fingerprints and graph neural networks (GNNs),…

Machine Learning · Computer Science 2025-08-13 Jiaxin Ju , Yizhen Zheng , Huan Yee Koh , Can Wang , Shirui Pan