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Inspired by the success of foundation models in applications such as ChatGPT, as graph data has been ubiquitous, one can envision the far-reaching impacts that can be brought by Graph Foundation Models (GFMs) with broader applications in…

Machine Learning · Computer Science 2024-11-12 Zehong Wang , Zheyuan Zhang , Nitesh V Chawla , Chuxu Zhang , Yanfang Ye

Many database resources, such as Reactome, collect manually annotated reactions, interactions, and pathways from peer-reviewed publications. The interactors (e.g., a protein), interactions, and pathways in these data resources are often…

Artificial Intelligence · Computer Science 2013-11-15 Yongqun He , Zoushuang Xiang

Ontologies play a critical role in Semantic Web technologies by providing a structured and standardized way to represent knowledge and enabling machines to understand the meaning of data. Several taxonomies and ontologies have been…

Digital Libraries · Computer Science 2023-05-09 Mahender Kumar , Ruby Rani , Mirko Botarelli , Gregory Epiophaniou , Carsten Maple

Data warehouses are nowadays an important component in every competitive system, it's one of the main components on which business intelligence is based. We can even say that many companies are climbing to the next level and use a set of…

Databases · Computer Science 2013-10-23 Naoual Mouhni , Abderrafiaa Elkalay

Scientific articles published prior to the "age of digitization" in the late 1990s contain figures which are "trapped" within their scanned pages. While progress to extract figures and their captions has been made, there is currently no…

Digital Libraries · Computer Science 2023-02-24 Jill P. Naiman , Peter K. G. Williams , Alyssa Goodman

The intention of this article is to propose the use of artificial intelligence to detect through analysis by UFO ontology the emergence of verbal and physical aggression related to psychosocial deficiencies and their provoking agents, in an…

Human-Computer Interaction · Computer Science 2024-03-15 Bruna Araújo de Castro Oliveira

Ontologies provide a systematic framework for organizing and leveraging knowledge, enabling smarter and more effective decision-making. In order to advance in the capitalization and augmentation of intelligence related to nowadays…

Social and Information Networks · Computer Science 2025-03-11 Alejandro David Cayuela Tudela , Javier Pastor-Galindo , Pantaleone Nespoli , José A. Ruipérez-Valiente

Urban flooding affects lives and infrastructure worldwide. Mapping inundation in complex urban environments from satellite imagery remains challenging due to limited spatial resolution, infrequent acquisitions, and cloud cover. We present…

Computer Vision and Pattern Recognition · Computer Science 2026-04-28 Rohit Mukherjee , Hannah K. Friedrich , Beth Tellman , Ariful Islam , Zhijie Zhang , Jonathan Giezendanner , Upmanu Lall , Venkataraman Lakshmi

Engineered solutions are becoming more complex and multi-disciplinary in nature. This evolution requires new techniques to enhance design and analysis tasks that incorporate data integration and interoperability across various engineering…

Artificial Intelligence · Computer Science 2022-06-22 Daniel Dunbar , Thomas Hagedorn , Mark Blackburn , John Dzielski , Steven Hespelt , Benjamin Kruse , Dinesh Verma , Zhongyuan Yu

The semantic web has received many contributions of researchers as ontologies which, in this context, i.e. within RDF linked data, are formalized conceptualizations that might use different protocols, such as RDFS, OWL DL and OWL FULL. In…

Artificial Intelligence · Computer Science 2017-10-30 Renato Fabbri

Integrating deep learning techniques, particularly language models (LMs), with knowledge representation techniques like ontologies has raised widespread attention, urging the need of a platform that supports both paradigms. Although…

Artificial Intelligence · Computer Science 2024-03-12 Yuan He , Jiaoyan Chen , Hang Dong , Ian Horrocks , Carlo Allocca , Taehun Kim , Brahmananda Sapkota

The last decade has seen the advent and consolidation of ontology based tools for the identification and biological interpretation of classes of genes, such as the Gene Ontology. The information accumulated time-by-time and included in the…

Molecular Networks · Quantitative Biology 2021-08-25 Salvatore Miccichè

In the context of Building Information Modelling, ontologies have been identified as interesting in achieving information interoperability. Regarding the construction and facility management domains, several IFC (Industry Foundation…

Artificial Intelligence · Computer Science 2015-11-13 Tarcisio Mendes de Farias , Ana Roxin , Christophe Nicolle

This paper presents a systematic survey on existing literature and seminal works relevant to the application of ontologies in different aspects of Cloud computing. Our hypothesis is that ontologies along with their reasoning capabilities…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-10 Fahim T. Imam

Ontologies serve as a one of the formal means to represent and model knowledge in computer science, electrical engineering, system engineering and other related disciplines. Ontologies within requirements engineering may be used for formal…

Software Engineering · Computer Science 2022-11-22 Hrvoje Belani , Petar Solic , Toni Perkovic

We present an update of the Universal FeynRules Output model format, commonly known as the UFO format, that is used by several automated matrix-element generators and high-energy physics software. We detail different features that have been…

The growing reliance on digital twins across various industries and domains brings with it semantic interoperability challenges. Ontologies are a well-known strategy for addressing such challenges, though given the complexity of the…

Artificial Intelligence · Computer Science 2024-08-19 Finn Wilson , Regina Hurley , Dan Maxwell , Jon McLellan , John Beverley

We aim to accelerate the original vision of the semantic web by revisiting design decisions that have defined the semantic web up until now. We propose a shift in direction that more broadly embraces existing data infrastructure by…

Databases · Computer Science 2024-07-30 Vleer Doing , Ryan Wisnesky

Semantic Web Rule Language (SWRL) combines OWL (Web Ontology Language) ontologies with Horn Logic rules of the Rule Markup Language (RuleML) family. Being supported by ontology editors, rule engines and ontology reasoners, it has become a…

Artificial Intelligence · Computer Science 2022-12-09 Nick Bassiliades

While contemporary semantic search systems offer to improve classical keyword-based search, they are not always adequate for complex domain specific information needs. The domain of prescription drug abuse, for example, requires knowledge…

Information Retrieval · Computer Science 2014-11-17 Delroy Cameron , Amit Sheth , Nishita Jaykumar , Krishnaprasad Thirunarayan , Gaurish Anand , Gary A. Smith