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Graph rigidity, the study of vertex realizations in $\mathbb{R}^d$ and the motions that preserve the induced edge lengths, has been the focus of extensive research for decades. Its equivalency to graph connectivity for $d=1$ is well known;…

Combinatorics · Mathematics 2025-12-22 Juan F. Presenza , Ignacio Mas , Juan I. Giribet , J. Ignacio Alvarez-Hamelin

A classic problem in unsupervised learning and data analysis is to find simpler and easy-to-visualize representations of the data that preserve its essential properties. A widely-used method to preserve the underlying hierarchical structure…

Data Structures and Algorithms · Computer Science 2020-08-18 Vincent Cohen-Addad , Karthik C. S. , Guillaume Lagarde

In cognitive neuroscience research, Representational Dissimilarity Matrices (RDMs) are often incomplete because pairwise similarity judgments cannot always be exhaustively collected as the number of pairs rapidly increases with the number…

Neurons and Cognition · Quantitative Biology 2025-06-04 Denise Moerel , Tijl Grootswagers

This paper rigorously solves the challenging problem of recognizing periodic patterns under rigid motion in Euclidean geometry. The 3-dimensional case is practically important for justifying the novelty of solid crystalline materials…

Metric Geometry · Mathematics 2025-10-30 Olga Anosova , Daniel Widdowson , Vitaliy Kurlin

This paper addresses the problem of planning under uncertainty in large Markov Decision Processes (MDPs). Factored MDPs represent a complex state space using state variables and the transition model using a dynamic Bayesian network. This…

Artificial Intelligence · Computer Science 2011-06-10 C. Guestrin , D. Koller , R. Parr , S. Venkataraman

(see paper for full abstract) Cut problems and connectivity problems on digraphs are two well-studied classes of problems from the viewpoint of parameterized complexity. After a series of papers over the last decade, we now have (almost)…

Data Structures and Algorithms · Computer Science 2019-10-07 Rajesh Chitnis , Andreas Emil Feldmann

Finite-element (FE) discretisations have emerged as a powerful real-space alternative to large-scale Kohn-Sham density functional theory (DFT) calculations, offering systematic convergence, excellent parallel scalability, while…

Computational Physics · Physics 2025-12-11 Gourab Panigrahi , Phani Motamarri

The construction of $r$-nets offers a powerful tool in computational and metric geometry. We focus on high-dimensional spaces and present a new randomized algorithm which efficiently computes approximate $r$-nets with respect to Euclidean…

Computational Geometry · Computer Science 2017-05-09 Georgia Avarikioti , Ioannis Z. Emiris , Loukas Kavouras , Ioannis Psarros

Disjoint paths problems are among the most prominent problems in combinatorial optimization. The edge- as well as vertex-disjoint paths problem, are NP-complete on directed and undirected graphs. But on undirected graphs, Robertson and…

Computational Complexity · Computer Science 2024-02-22 Dario Cavallaro , Ken-ichi Kawarabayashi , Stephan Kreutzer

In this paper we study a maximization version of the classical Edge Dominating Set (EDS) problem, namely, the Upper EDS problem, in the realm of Parameterized Complexity. In this problem, given an undirected graph $G$, a positive integer…

Data Structures and Algorithms · Computer Science 2022-08-05 Ajinkya Gaikwad , Soumen Maity

Incorporating a non-Euclidean variable metric to first-order algorithms is known to bring enhancement. However, due to the lack of an optimal choice, such an enhancement appears significantly underestimated. In this work, we establish a…

Optimization and Control · Mathematics 2023-11-21 Yifan Ran

We present a new approach to approximate nearest-neighbor queries in fixed dimension under a variety of non-Euclidean distances. We are given a set $S$ of $n$ points in $\mathbb{R}^d$, an approximation parameter $\varepsilon > 0$, and a…

Computational Geometry · Computer Science 2023-06-28 Ahmed Abdelkader , Sunil Arya , Guilherme D. da Fonseca , David M. Mount

Extreme learning machine (ELM) is a methodology for solving partial differential equations (PDEs) using a single hidden layer feed-forward neural network. It presets the weight/bias coefficients in the hidden layer with random values, which…

Numerical Analysis · Mathematics 2025-04-30 Chang-Ock Lee , Youngkyu Lee , Byungeun Ryoo

Node embedding learns a low-dimensional representation for each node in the graph. Recent progress on node embedding shows that proximity matrix factorization methods gain superb performance and scale to large graphs with millions of nodes.…

Machine Learning · Computer Science 2021-08-13 Xingyi Zhang , Kun Xie , Sibo Wang , Zengfeng Huang

We study the classic Euclidean Minimum Spanning Tree (MST) problem in the Massively Parallel Computation (MPC) model. Given a set $X \subset \mathbb{R}^d$ of $n$ points, the goal is to produce a spanning tree for $X$ with weight within a…

Data Structures and Algorithms · Computer Science 2023-08-02 Rajesh Jayaram , Vahab Mirrokni , Shyam Narayanan , Peilin Zhong

The 2-Wasserstein distance (or RMS distance) is a useful measure of similarity between probability distributions that has exciting applications in machine learning. For discrete distributions, the problem of computing this distance can be…

Computational Geometry · Computer Science 2020-07-17 Nathaniel Lahn , Sharath Raghvendra

Nuclear Magnetic Resonance (NMR) Spectroscopy is a widely used technique to predict the native structure of proteins. However, NMR machines are only able to report approximate and partial distances between pair of atoms. To build the…

Neural and Evolutionary Computing · Computer Science 2014-11-18 Md. Lisul Islam , Swakkhar Shatabda , M. Sohel Rahman

Finding an optimal match between two different crystal structures underpins many important materials science problems, including describing solid-solid phase transitions, developing models for interface and grain boundary structures. In…

Materials Science · Physics 2020-02-21 Félix Therrien , Peter Graf , Vladan Stevanović

We consider the popular $k$-means problem in $d$-dimensional Euclidean space. Recently Friggstad, Rezapour, Salavatipour [FOCS'16] and Cohen-Addad, Klein, Mathieu [FOCS'16] showed that the standard local search algorithm yields a…

Data Structures and Algorithms · Computer Science 2017-08-30 Vincent Cohen-Addad

Parameterized complexity theory has enabled a refined classification of the difficulty of NP-hard optimization problems on graphs with respect to key structural properties, and so to a better understanding of their true difficulties. More…

Data Structures and Algorithms · Computer Science 2017-10-19 David Coudert , Guillaume Ducoffe , Alexandru Popa