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The Caf\'e Wall illusion is one of a class of tilt illusions where lines that are parallel appear to be tilted. We demonstrate that a simple Differences of Gaussian model provides an explanatory mechanism for the illusory tilt perceived in…

Neurons and Cognition · Quantitative Biology 2020-05-12 Nasim Nematzadeh , David M. W. Powers

This paper is about geometric and Riemannian properties of Engel structures, i.e. maximally non-integrable $2$-plane fields on $4$-manifolds. Two $1$-forms $\alpha$ and $\beta$ are called Engel defining forms if…

Differential Geometry · Mathematics 2019-05-23 Nicola Pia

The mechanisms involved in transforming early visual signals to curvature representations in V4 are unknown. We propose a hierarchical model that reveals V1/V2 encodings that are essential components for this transformation to the reported…

Neurons and Cognition · Quantitative Biology 2022-06-16 Paria Mehrani , John K. Tsotsos

Complex Chern-Simons bundles are line bundles with connection, originating in the study of quantization of moduli spaces of flat connections with complex gauge groups. In this paper we introduce and study these bundles in the families…

Algebraic Geometry · Mathematics 2022-03-17 Dennis Eriksson , Gerard Freixas i Montplet , Richard A. Wentworth

Early processing of visual information takes place in the human retina. Mimicking neurobiological structures and functionalities of the retina provide a promising pathway to achieving vision sensor with highly efficient image processing.…

In this paper, an efficient implementation for a recognition system based on the original HMAX model of the visual cortex is proposed. Various optimizations targeted to increase accuracy at the so-called layers S1, C1, and S2 of the HMAX…

Computer Vision and Pattern Recognition · Computer Science 2017-11-22 Ahmad W. Bitar , Mohammad M. Mansour , Ali Chehab

Each sub-Riemannian geometry with bracket generating distribution enjoys a background structure determined by the distribution itself. At the same time, those geometries with constant sub-Riemannian symbols determine a unique Cartan…

Differential Geometry · Mathematics 2018-10-05 D. Alekseevsky , A. Medvedev , J. Slovak

To any metric spaces there is an associated metric profile. The rectifiability of the metric profile gives a good notion of curvature of a sub-Riemannian space. We shall say that a curvature class is the rectifiability class of the metric…

Metric Geometry · Mathematics 2007-05-23 Marius Buliga

Cells sense the geometry and stiffness of their adhesive environment by active contractility. For strong adhesion to flat substrates, two-dimensional contractile network models can be used to understand how force is distributed throughout…

Cell Behavior · Quantitative Biology 2015-06-03 P. Guthardt Torres , I. B. Bischofs , U. S. Schwarz

Collective cell motions underlie structure formation during embryonic development. Tissues exhibit emergent multicellular characteristics such as jamming, rigidity transitions, and glassy dynamics, but there remain questions about how those…

Biological Physics · Physics 2023-12-13 Evan Thomas , Sevan Hopyan

We present a general construction of embedded minimal and constant mean curvature surfaces in $\mathbb{S}^n$ and one-phase free boundaries joined by a smooth interpolation by capillary hypersurfaces. This framework recovers all known…

Differential Geometry · Mathematics 2026-04-07 Benjy Firester , Raphael Tsiamis

We present a systematic study of the influence of cell geometry on the orientational distribution of microtubules (MTs) nucleated from a single microtubule organizing center (MTOC). For simplicity we consider an elliptical cell geometry, a…

Biomolecules · Quantitative Biology 2022-11-30 Panayiotis Foteinopoulos , Bela M. Mulder

We present a conditional generative model to learn variation in cell and nuclear morphology and the location of subcellular structures from microscopy images. Our model generalizes to a wide range of subcellular localization and allows for…

Machine Learning · Statistics 2017-05-02 Gregory R. Johnson , Rory M. Donovan-Maiye , Mary M. Maleckar

The curvature sensitive localization of proteins on membranes is vital for many cell biological processes. Coarse-grained models are routinely employed to study the curvature sensing phenomena and membrane morphology at the length scale of…

Soft Condensed Matter · Physics 2019-10-22 T. V. Sachin Krishnan , Sovan L. Das , P. B. Sunil Kumar

We propose to use bifurcation theory and pattern formation as theoretical probes for various hypotheses about the neural organization of the brain. This allows us to make predictions about the kinds of patterns that should be observed in…

Pattern Formation and Solitons · Physics 2015-05-13 Pascal Chossat , Olivier Faugeras

Classical models describe primary visual cortex (V1) as a filter bank of orientation-selective linear-nonlinear (LN) or energy models, but these models fail to predict neural responses to natural stimuli accurately. Recent work shows that…

Why does our visual system fail to reconstruct reality, when we look at certain patterns? Where do Geometrical illusions start to emerge in the visual pathway? How far should we take computational models of vision with the same visual…

Computer Vision and Pattern Recognition · Computer Science 2017-09-14 Nasim Nematzadeh , David M. W. Powers , Trent W. Lewis

We introduce the concept of self-tuned criticality as a general mechanism for signal detection in sensory systems. In the case of hearing, we argue that active amplification of faint sounds is provided by a dynamical system which is…

Biological Physics · Physics 2009-11-06 Sebastien Camalet , Thomas Duke , Frank Julicher , Jacques Prost

Cellular automata (CA), originally developed as computational models of natural processes, have become a central subject in the study of complex systems and generative visual forms. Among them, the Ulam-Warburton Cellular Automaton (UWCA)…

Cellular Automata and Lattice Gases · Physics 2026-01-28 Chung-En Hao , Ivan C. H. Liu

We investigate a continuum mechanical model for an adherent cell on two dimensional adhesive micropatterned substrates. The cell is modeled as an isotropic and homogeneous elastic material subject to uniform internal contractile stresses.…

Biological Physics · Physics 2013-12-30 Shiladitya Banerjee , Rastko Sknepnek , M. Cristina Marchetti