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Many real-world graphs (networks) are heterogeneous with different types of nodes and edges. Heterogeneous graph embedding, aiming at learning the low-dimensional node representations of a heterogeneous graph, is vital for various…

Social and Information Networks · Computer Science 2021-12-15 Wentao Xu , Yingce Xia , Weiqing Liu , Jiang Bian , Jian Yin , Tie-Yan Liu

Graph Transformer shows remarkable potential in brain network analysis due to its ability to model graph structures and complex node relationships. Most existing methods typically model the brain as a flat network, ignoring its modular…

Machine Learning · Computer Science 2025-11-25 Jiajun Ma , Yongchao Zhang , Chao Zhang , Zhao Lv , Shengbing Pei

Exploring the intrinsic interconnections between the knowledge encoded in PRe-trained Deep Neural Networks (PR-DNNs) of heterogeneous tasks sheds light on their mutual transferability, and consequently enables knowledge transfer from one…

Computer Vision and Pattern Recognition · Computer Science 2020-03-18 Jie Song , Yixin Chen , Jingwen Ye , Xinchao Wang , Chengchao Shen , Feng Mao , Mingli Song

Neural network architectures designed for function parameterization, such as the Bag-of-Functions (BoF) framework, bridge the gap between the expressivity of deep learning and the interpretability of classical signal processing. However,…

Machine Learning · Computer Science 2026-03-18 David Orlando Salazar Torres , Diyar Altinses , Andreas Schwung

In this paper, we focus on graph representation learning of heterogeneous information network (HIN), in which various types of vertices are connected by various types of relations. Most of the existing methods conducted on HIN revise…

Machine Learning · Computer Science 2019-12-24 Huiting Hong , Hantao Guo , Yucheng Lin , Xiaoqing Yang , Zang Li , Jieping Ye

The exponential rise in data generation has led to vast, heterogeneous datasets crucial for predictive analytics and decision-making. Ensuring data quality and semantic integrity remains a challenge. This paper presents a brain-inspired…

Machine Learning · Computer Science 2025-03-06 Ashwin Viswanathan Kannan , Johnson P Thomas , Abhimanyu Mukerji

An increasing number of studies have utilized interactive deep learning as the analytic model of visual analytics systems for complex sensemaking tasks. In these systems, traditional interactive dimensionality reduction (DR) models are…

Human-Computer Interaction · Computer Science 2024-02-28 Yali Bian , Rebecca Faust , Chris North

Knowledge Graph-based Retrieval-Augmented Generation (KG-RAG) significantly enhances the reasoning capabilities of LargeLanguage Models by leveraging structured knowledge. However, existing KG-RAG frameworks typically operate as open-loop…

Information Retrieval · Computer Science 2025-08-14 Xujie Yuan , Shimin Di , Jielong Tang , Libin Zheng , Jian Yin

Graphs are ubiquitous for modeling complex relationships between objects across various fields. Graph neural networks (GNNs) have become a mainstream technique for graph-based applications, but their performance heavily relies on abundant…

Machine Learning · Computer Science 2025-02-27 Xingtong Yu , Jie Zhang , Yuan Fang , Renhe Jiang

Graphs have a superior ability to represent relational data, like chemical compounds, proteins, and social networks. Hence, graph-level learning, which takes a set of graphs as input, has been applied to many tasks including comparison,…

Machine Learning · Computer Science 2023-05-26 Zhenyu Yang , Ge Zhang , Jia Wu , Jian Yang , Quan Z. Sheng , Shan Xue , Chuan Zhou , Charu Aggarwal , Hao Peng , Wenbin Hu , Edwin Hancock , Pietro Liò

Existing Graph Neural Networks (GNNs) follow the message-passing mechanism that conducts information interaction among nodes iteratively. While considerable progress has been made, such node interaction paradigms still have the following…

Machine Learning · Computer Science 2023-04-14 Jie Chen , Zilong Li , Yin Zhu , Junping Zhang , Jian Pu

Neuropsychological studies suggest that co-operative activities among different brain functional areas drive high-level cognitive processes. To learn the brain activities within and among different functional areas of the brain, we propose…

Neural and Evolutionary Computing · Computer Science 2024-10-28 Yi Ding , Neethu Robinson , Chengxuan Tong , Qiuhao Zeng , Cuntai Guan

Recent studies in neuroscience highlight the significant potential of brain connectivity networks, which are commonly constructed from functional magnetic resonance imaging (fMRI) data for brain disorder diagnosis. Traditional brain…

The integration of Spiking Neural Networks (SNNs) and Graph Neural Networks (GNNs) is gradually attracting attention due to the low power consumption and high efficiency in processing the non-Euclidean data represented by graphs. However,…

Neural and Evolutionary Computing · Computer Science 2025-07-15 Nan Yin , Mengzhu Wang , Zhenghan Chen , Giulia De Masi , Bin Gu , Huan Xiong

Resting-state functional magnetic resonance imaging (rs-fMRI) is a noninvasive technique pivotal for understanding human neural mechanisms of intricate cognitive processes. Most rs-fMRI studies compute a single static functional…

Neurons and Cognition · Quantitative Biology 2025-02-25 Bishal Thapaliya , Robyn Miller , Jiayu Chen , Yu-Ping Wang , Esra Akbas , Ram Sapkota , Bhaskar Ray , Pranav Suresh , Santosh Ghimire , Vince Calhoun , Jingyu Liu

Massive social media data can reflect people's authentic thoughts, emotions, communication, etc., and therefore can be analyzed for early detection of mental health problems such as depression. Existing works about early depression…

Social and Information Networks · Computer Science 2025-03-04 Chen Chen , Mingwei Li , Fenghuan Li , Haopeng Chen , Yuankun Lin

The latest biological findings observe that the traditional motionless 'lock-and-key' theory is not generally applicable because the receptor and ligand are constantly moving. Nonetheless, remarkable changes in associated atomic sites and…

Computational Engineering, Finance, and Science · Computer Science 2023-11-01 Fang Wu , Shuting Jin , Yinghui Jiang , Xurui Jin , Bowen Tang , Zhangming Niu , Xiangrong Liu , Qiang Zhang , Xiangxiang Zeng , Stan Z. Li

Knowledge Graphs (KG) are the backbone of many data-intensive applications since they can represent data coupled with its meaning and context. Aligning KGs across different domains and providers is necessary to afford a fuller and…

Artificial Intelligence · Computer Science 2023-10-12 Pedro Giesteira Cotovio , Ernesto Jimenez-Ruiz , Catia Pesquita

It has become increasingly popular to study the brain as a network due to the realization that functionality cannot be explained exclusively by independent activation of specialized regions. Instead, across a large spectrum of behaviors,…

Neurons and Cognition · Quantitative Biology 2014-07-22 Petko Bogdanov , Nazli Dereli , Danielle S. Bassett , Scott T. Grafton , Ambuj K. Singh

Multi-modal pre-training and knowledge discovery are two important research topics in multi-modal machine learning. Nevertheless, none of existing works make attempts to link knowledge discovery with knowledge guided multi-modal…

Computation and Language · Computer Science 2022-06-14 Zhihao Fan , Zhongyu Wei , Jingjing Chen , Siyuan Wang , Zejun Li , Jiarong Xu , Xuanjing Huang