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Rotation-invariance is a desired property of machine-learning models for medical image analysis and in particular for computational pathology applications. We propose a framework to encode the geometric structure of the special Euclidean…

Computer Vision and Pattern Recognition · Computer Science 2020-02-21 Maxime W. Lafarge , Erik J. Bekkers , Josien P. W. Pluim , Remco Duits , Mitko Veta

Predicting the binding sites of target proteins plays a fundamental role in drug discovery. Most existing deep-learning methods consider a protein as a 3D image by spatially clustering its atoms into voxels and then feed the voxelized…

Biomolecules · Quantitative Biology 2024-07-24 Yang Zhang , Zhewei Wei , Ye Yuan , Chongxuan Li , Wenbing Huang

We present the group equivariant conditional neural process (EquivCNP), a meta-learning method with permutation invariance in a data set as in conventional conditional neural processes (CNPs), and it also has transformation equivariance in…

Machine Learning · Computer Science 2021-02-18 Makoto Kawano , Wataru Kumagai , Akiyoshi Sannai , Yusuke Iwasawa , Yutaka Matsuo

Euclidean E(3) equivariant neural networks that employ scalar fields on position-orientation space M(3) have been effectively applied to tasks such as predicting molecular dynamics and properties. To perform equivariant convolutional-like…

Differential Geometry · Mathematics 2025-07-04 Gijs Bellaard , Bart M. N. Smets , Remco Duits

The molecular electrostatic potential (MEP) is a key quantity for describing and predicting intermolecular and ion-molecule interactions. Here, we assess the ability of machine-learning (ML) models to infer the MEP, based on the equivariant…

Chemical Physics · Physics 2026-01-16 Kadri Muuga , Lisanne Knijff , Chao Zhang

The driving of vibrational motion by external electric fields is a topic of continued interest, due to the possibility of assessing new or metastable material phases with desirable properties. Here, we combine ab initio molecular dynamics…

Materials Science · Physics 2025-09-15 Elia Stocco , Christian Carbogno , Mariana Rossi

We survey the mathematical foundations of geometric deep learning, focusing on group equivariant and gauge equivariant neural networks. We develop gauge equivariant convolutional neural networks on arbitrary manifolds $\mathcal{M}$ using…

Machine-learned interatomic potentials based on local environment descriptors represent a transformative leap over traditional potentials based on rigid functional forms in terms of prediction accuracy. However, a challenge in their…

Materials Science · Physics 2019-04-30 Zhi Deng , Chi Chen , Xiang-Guo Li , Shyue Ping Ong

Coulomb interaction, following an inverse-square force-law, quantifies the amount of force between two stationary and electrically charged particles. The long-range nature of Coulomb interactions poses a major challenge to molecular…

Computational Physics · Physics 2022-01-26 Jiuyang Liang , Pan Tan , Yue Zhao , Lei Li , Shi Jin , Liang Hong , Zhenli Xu

While end-to-end approaches have achieved state-of-the-art performance in many perception tasks, they are not yet able to compete with 3D geometry-based methods in pose estimation. Moreover, absolute pose regression has been shown to be…

Computer Vision and Pattern Recognition · Computer Science 2022-04-06 Mohamed Adel Musallam , Vincent Gaudilliere , Miguel Ortiz del Castillo , Kassem Al Ismaeil , Djamila Aouada

In this paper, we utilize hyperspheres and regular $n$-simplexes and propose an approach to learning deep features equivariant under the transformations of $n$D reflections and rotations, encompassed by the powerful group of O$(n)$. Namely,…

Machine Learning · Computer Science 2024-05-31 Pavlo Melnyk , Michael Felsberg , Mårten Wadenbäck , Andreas Robinson , Cuong Le

Invariance under symmetry is an important problem in machine learning. Our paper looks specifically at equivariant neural networks where transformations of inputs yield homomorphic transformations of outputs. Here, steerable CNNs have…

Machine Learning · Computer Science 2021-09-15 Daniel Franzen , Michael Wand

Driven by novel approaches and computational techniques, second-principles atomic potentials are nowadays at the forefront of computational materials science, enabling large-scale simulations of material properties with…

Materials Science · Physics 2025-10-10 Miao Yu , Fernando Gómez-Ortiz , Louis Bastogne , Jin-Zhu Zhao , Philippe Ghosez

Omnidirectional images and spherical representations of $3D$ shapes cannot be processed with conventional 2D convolutional neural networks (CNNs) as the unwrapping leads to large distortion. Using fast implementations of spherical and…

Computer Vision and Pattern Recognition · Computer Science 2020-12-09 Suhas Lohit , Shubhendu Trivedi

We present a convolutional network that is equivariant to rigid body motions. The model uses scalar-, vector-, and tensor fields over 3D Euclidean space to represent data, and equivariant convolutions to map between such representations.…

Machine Learning · Computer Science 2018-10-30 Maurice Weiler , Mario Geiger , Max Welling , Wouter Boomsma , Taco Cohen

We consider the task of predicting Hamiltonian matrices to accelerate electronic structure calculations, which plays an important role in physics, chemistry, and materials science. Motivated by the inherent relationship between the…

Machine Learning · Computer Science 2026-05-27 Haiyang Yu , Yuchao Lin , Xuan Zhang , Xiaofeng Qian , Shuiwang Ji

3D reconstruction and novel view rendering can greatly benefit from geometric priors when the input views are not sufficient in terms of coverage and inter-view baselines. Deep learning of geometric priors from 2D images often requires each…

Computer Vision and Pattern Recognition · Computer Science 2023-06-09 Yinshuang Xu , Jiahui Lei , Kostas Daniilidis

We propose a general architecture that combines the coefficient learning scheme with a residual operator layer for learning mappings between continuous functions in the 3D Euclidean space. Our proposed model is guaranteed to achieve…

Machine Learning · Computer Science 2023-11-21 Chaoran Cheng , Jian Peng

Machine learning potentials have become an important tool for atomistic simulations in many fields, from chemistry via molecular biology to materials science. Most of the established methods, however, rely on local properties and are thus…

Materials Science · Physics 2021-03-17 Tsz Wai Ko , Jonas A. Finkler , Stefan Goedecker , Jörg Behler

In computational molecular science, calculation of electrostatic interactions involving charged atoms - the strongest interactions in condensed phases, is a major bottleneck. We propose a quantum-classical algorithm for fast, yet, accurate…

Quantum Physics · Physics 2026-02-18 Mansur Ziiatdinov , Igor Novikov , Farid Ablayev , Valeri Barsegov