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We give necessary and sufficient criteria for elementary operations in a two-dimensional terrain to preserve the persistent homology induced by the height function. These operations are edge flips and removals of interior vertices,…

Computational Geometry · Computer Science 2020-09-14 Ulderico Fugacci , Michael Kerber , Hugo Manet

A topology preserving skeleton is a synthetic representation of an object that retains its topology and many of its significant morphological properties. The process of obtaining the skeleton, referred to as skeletonization or thinning, is…

Computer Vision and Pattern Recognition · Computer Science 2015-06-17 Paweł Dłotko , Ruben Specogna

Optimization, a key tool in machine learning and statistics, relies on regularization to reduce overfitting. Traditional regularization methods control a norm of the solution to ensure its smoothness. Recently, topological methods have…

Machine Learning · Computer Science 2020-11-11 Arnur Nigmetov , Aditi S. Krishnapriyan , Nicole Sanderson , Dmitriy Morozov

Using persistent homology to guide optimization has emerged as a novel application of topological data analysis. Existing methods treat persistence calculation as a black box and backpropagate gradients only onto the simplices involved in…

Computational Geometry · Computer Science 2023-11-06 Arnur Nigmetov , Dmitriy Morozov

A central problem in topological data analysis is that of computing the homology of a given simplicial complex. Said complexes can have arbitrary large number of simplices, as can happen, for example, if the space is the Rips-Vietoris or…

Combinatorics · Mathematics 2021-11-11 Francisco Martinez-Figueroa

Topological loss based on persistent homology has shown promise in various applications. A topological loss enforces the model to achieve certain desired topological property. Despite its empirical success, less is known about the…

Machine Learning · Computer Science 2022-06-14 Yikai Zhang , Jiachen Yao , Yusu Wang , Chao Chen

Unsupervised representation learning methods are widely used for gaining insight into high-dimensional, unstructured, or structured data. In some cases, users may have prior topological knowledge about the data, such as a known cluster…

Machine Learning · Computer Science 2023-11-08 Edith Heiter , Robin Vandaele , Tijl De Bie , Yvan Saeys , Jefrey Lijffijt

Network systems consist of subsystems and their interconnections, and provide a powerful framework for analysis, modeling and control of complex systems. However, subsystems may have high-dimensional dynamics, and the amount and nature of…

Optimization and Control · Mathematics 2020-12-07 Xiaodong Cheng , Jacquelien M. A. Scherpen

This paper presents a practical approach for the optimization of topological simplification, a central pre-processing step for the analysis and visualization of scalar data. Given an input scalar field f and a set of "signal" persistence…

Machine Learning · Computer Science 2024-08-22 Mohamed Kissi , Mathieu Pont , Joshua A. Levine , Julien Tierny

A new method is given for computing generators of the homology groups with integer coefficients for any finite $T_0$-space. An important role in this method is played by irreducible cycles which are defined here and give rise to continuous…

Algebraic Topology · Mathematics 2018-11-13 Patrick Erik Bradley

Persistent homology is a topological feature used in a variety of applications such as generating features for data analysis and penalizing optimization problems. We develop an approach to accelerate persistent homology computations…

Algebraic Topology · Mathematics 2023-01-19 Yuan Luo , Bradley J. Nelson

We introduce the Insertion Chain Complex, a higher-dimensional extension of insertion graphs, as a new framework for analyzing finite sets of words. We study its topological and combinatorial properties, in particular its homology groups,…

Combinatorics · Mathematics 2025-09-17 Nataša Jonoska , Francisco Martinez-Figueroa , Masahico Saito

Persistent homology is a popular and powerful tool for capturing topological features of data. Advances in algorithms for computing persistent homology have reduced the computation time drastically -- as long as the algorithm does not…

Computational Geometry · Computer Science 2013-10-03 Ulrich Bauer , Michael Kerber , Jan Reininghaus

We provide a short introduction to the field of topological data analysis and discuss its possible relevance for the study of complex systems. Topological data analysis provides a set of tools to characterise the shape of data, in terms of…

Data Analysis, Statistics and Probability · Physics 2018-12-05 Vsevolod Salnikov , Daniele Cassese , Renaud Lambiotte

The aim of this paper is to introduce a novel dictionary learning algorithm for sparse representation of signals defined over combinatorial topological spaces, specifically, regular cell complexes. Leveraging Hodge theory, we embed topology…

Signal Processing · Electrical Eng. & Systems 2025-03-17 Enrico Grimaldi , Claudio Battiloro , Paolo Di Lorenzo

Regularization plays a crucial role in supervised learning. Most existing methods enforce a global regularization in a structure agnostic manner. In this paper, we initiate a new direction and propose to enforce the structural simplicity of…

Machine Learning · Computer Science 2018-10-17 Chao Chen , Xiuyan Ni , Qinxun Bai , Yusu Wang

We present an innovative algorithm that simplifies the topology of a cross-field. Our algorithm works through macro-operations that allow us editing the graph of separatrices, which is extracted from a cross-field, while maintaining it…

Computational Geometry · Computer Science 2010-10-15 Daniele Panozzo , Enrico Puppo

Persistent homology is a popular data analysis technique that is used to capture the changing topology of a filtration associated with some simplicial complex $K$. These topological changes are summarized in persistence diagrams. We propose…

Computational Geometry · Computer Science 2018-10-11 Tamal K. Dey , Ryan Slechta

Motivated by questions about simplification of topology, we take a discrete approach to the dependency of simplifying operations, using methods based on combinatorial gradient dynamics. We interpret the filter in persistent homology as a…

Algebraic Topology · Mathematics 2026-05-26 Herbert Edelsbrunner , Michał Lipiński , Marian Mrozek , Manuel Soriano-Trigueros

We describe two efficient on-line algorithms to simplify weighted graphs by eliminating degree-two vertices. Our algorithms are on-line in that they react to updates on the data, keeping the simplification up-to-date. The supported updates…

Data Structures and Algorithms · Computer Science 2007-05-23 Floris Geerts , Peter Revesz , Jan Van den Bussche
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