Related papers: Worst-Case Examples for the Computation of Persist…
Recently, multi-scale notions of local homology (a variant of persistent homology) have been used to study the local structure of spaces around a given point from a point cloud sample. Current reconstruction guarantees rely on constructing…
Computing Persistent Homology for large point clouds remains a bottleneck for the wider adoption of persistent homology by the scientific community. We present an algorithm which can compute the degree-1 Vietoris-Rips Persistent Homology of…
We present an algorithm for computing the barcode of the image of a morphisms in persistent homology induced by an inclusion of filtered finite-dimensional chain complexes. These algorithms make use of the clearing optimization and can be…
A challenge in computational topology is to deal with large filtered geometric complexes built from point cloud data such as Vietoris-Rips filtrations. This has led to the development of schemes for parallel computation and compression…
We give an $O(n^2(k+\log n))$ algorithm for computing the $k$-dimensional persistent homology of a filtration of clique complexes of cyclic graphs on $n$ vertices. This is nearly quadratic in the number of vertices $n$, and therefore a…
We consider the problem of computing persistent homology (PH) for large-scale Euclidean point cloud data, aimed at downstream machine learning tasks, where the exponential growth of the most widely-used Vietoris-Rips complex imposes serious…
Computation of the simplicial complexes of a large point cloud often relies on extracting a sample, to reduce the associated computational burden. The study considers sampling critical points of a Morse function associated to a point cloud,…
In recent years, the expander decomposition method was used to develop many graph algorithms, resulting in major improvements to longstanding complexity barriers. This powerful hammer has led the community to (1) believe that most problems…
A recent paper by Abboud and Wallheimer [ITCS 2023] presents self-reductions for various fundamental graph problems, which transform worst-case instances to expanders, thus proving that the complexity remains unchanged if the input is…
The Vietoris-Rips filtration for an $n$-point metric space is a sequence of large simplicial complexes adding a topological structure to the otherwise disconnected space. The persistent homology is a key tool in topological data analysis…
We present a unified pipeline for univariate time series classification via complex networks and persistent homology. A time series is mapped to a graph through one of five constructions across three families (visibility (natural and…
The long computational time and large memory requirements for computing Vietoris Rips persistent homology from point clouds remains a significant deterrent to its application to big data. This paper aims to reduce the memory footprint of…
The computational cost of persistent homology is often dominated by the growth of the underlying simplicial filtrations. Many different filtrations exist, each with its own assumptions and trade-offs, but all face some form of this growth…
We present a parallelizable algorithm for computing the persistent homology of a filtered chain complex. Our approach differs from the commonly used reduction algorithm by first computing persistence pairs within local chunks, then…
A crucial step in the analysis of persistent homology is the transformation of data into an appropriate topological object (in our case, a simplicial complex). Modern packages for persistent homology often construct Vietoris--Rips or other…
In this paper we define, implement, and investigate a simplicial complex construction for computing persistent homology of Euclidean point cloud data, which we call the Delaunay-Rips complex (DR). Assigning the Vietoris-Rips weights to…
Persistence diagrams are useful displays that give a summary information regarding the topological features of some phenomenon. Usually, only one persistence diagram is available, and replicated persistence diagrams are needed for…
In this thesis, we design algorithms for several NP-hard problems in both worst and beyond worst case settings. In the first part of the thesis, we apply the traditional worst case methodology and design approximation algorithms for the Hub…
Persistence diagrams, which summarize the birth and death of homological features extracted from data, are employed as stable signatures for applications in image analysis and other areas. Besides simply considering the multiset of…
We provide novel lower bounds on the Betti numbers of Vietoris-Rips complexes of hypercube graphs of all dimensions, and at all scales. In more detail, let $Q_n$ be the vertex set of $2^n$ vertices in the $n$-dimensional hypercube graph,…