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Graph-based semi-supervised learning (SSL) algorithms predict labels for all nodes based on provided labels of a small set of seed nodes. Classic methods capture the graph structure through some underlying diffusion process that propagates…

Machine Learning · Computer Science 2017-03-16 Eliav Buchnik , Edith Cohen

Imputing missing node features in graphs is challenging, particularly under high missing rates. Existing methods based on latent representations or global diffusion often fail to produce reliable estimates, and may propagate errors across…

Machine Learning · Computer Science 2026-01-28 Xin Qiao , Shijie Sun , Anqi Dong , Cong Hua , Xia Zhao , Longfei Zhang , Guangming Zhu , Liang Zhang

Conventional diffusion models typically relies on a fixed forward process, which implicitly defines complex marginal distributions over latent variables. This can often complicate the reverse process' task in learning generative…

Machine Learning · Statistics 2025-06-10 Grigory Bartosh , Dmitry Vetrov , Christian A. Naesseth

Using the notion of effective distance proposed by Brockmann and Helbing, complex spatiotemporal processes of epidemic spreading can be reduced to circular wave propagation patterns with well-defined wavefronts. This hidden homogeneity of…

Physics and Society · Physics 2018-02-13 Yifan Chen , Yu Zhou , Ross Murch , Tadashi Nakano

Graph foundation models have demonstrated remarkable adaptability across diverse downstream tasks through large-scale pretraining on graphs. However, existing implementations of the backbone model, graph transformers, are typically limited…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-21 Jun-Liang Lin , Kamesh Madduri , Mahmut Taylan Kandemir

We present new message passing algorithms for performing inference with graphical models. Our methods are designed for the most difficult inference problems where loopy belief propagation and other heuristics fail to converge. Belief…

Artificial Intelligence · Computer Science 2022-07-19 Anna Grim , Pedro Felzenszwalb

Due to the irregular nature of connections in most graph datasets, partitioning graph analysis algorithms across multiple computational nodes that do not share a common memory inevitably leads to large amounts of interconnect traffic.…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-01-22 Nina Engelhardt , Hayden K. -H. So

Successful machine learning on graphs or networks requires embeddings that not only represent nodes and edges as low-dimensional vectors but also preserve the graph structure. Established methods for generating embeddings require flexible…

Machine Learning · Computer Science 2026-04-13 Aishwarya Sarkar , Sayan Ghosh , Nathan R. Tallent , Ali Jannesari

Gradient-based data attribution methods, such as influence functions, are critical for understanding the impact of individual training samples without requiring repeated model retraining. However, their scalability is often limited by the…

Machine Learning · Computer Science 2025-10-29 Pingbang Hu , Joseph Melkonian , Weijing Tang , Han Zhao , Jiaqi W. Ma

Graph embedding is a popular algorithmic approach for creating vector representations for individual vertices in networks. Training these algorithms at scale is important for creating embeddings that can be used for classification, ranking,…

Machine Learning · Computer Science 2019-07-04 C. Bayan Bruss , Anish Khazane , Jonathan Rider , Richard Serpe , Saurabh Nagrecha , Keegan E. Hines

Influence estimation aims to predict the total influence spread in social networks and has received surged attention in recent years. Most current studies focus on estimating the total number of influenced users in a social network, and…

Social and Information Networks · Computer Science 2023-08-22 Yingdan Shi , Jingya Zhou , Congcong Zhang

Training Graph Neural Networks (GNNs) on real-world graphs consisting of billions of nodes and edges is quite challenging, primarily due to the substantial memory needed to store the graph and its intermediate node and edge features, and…

Machine Learning · Computer Science 2023-08-08 Kaidi Cao , Rui Deng , Shirley Wu , Edward W Huang , Karthik Subbian , Jure Leskovec

Despite advances in the field of Graph Neural Networks (GNNs), only a small number (~5) of datasets are currently used to evaluate new models. This continued reliance on a handful of datasets provides minimal insight into the performance…

Machine Learning · Computer Science 2022-07-11 John Palowitch , Anton Tsitsulin , Brandon Mayer , Bryan Perozzi

To develop effective and efficient graph similarity learning (GSL) models, a series of data-driven neural algorithms have been proposed in recent years. Although GSL models are frequently deployed in privacy-sensitive scenarios, the user…

Machine Learning · Computer Science 2022-10-24 Yupeng Hou , Wayne Xin Zhao , Yaliang Li , Ji-Rong Wen

We present MT-lib, an efficient message transfer library for messages gather and scatter in benchmarks like Graph500 for Supercomputers. Our library includes MST version as well as new-MST version. The MT-lib is deliberately kept…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-03-30 Xinbiao Gan , Wen Tan

In recent years, Graph Neural Networks (GNNs) have achieved remarkable success in many graph mining tasks. However, scaling them to large graphs is challenging due to the high computational and storage costs of repeated feature propagation…

Machine Learning · Computer Science 2025-04-11 Yuxuan Liang , Wentao Zhang , Zeang Sheng , Ling Yang , Quanqing Xu , Jiawei Jiang , Yunhai Tong , Bin Cui

Robot swarms require cohesive collective behaviour to address diverse challenges, including shape formation and decision-making. Existing approaches often treat consensus in discrete and continuous decision spaces as distinct problems. We…

Robotics · Computer Science 2025-08-26 Aalok Patwardhan , Andrew J. Davison

Modelling epidemic events such as COVID-19 cases in both time and space dimensions is an important but challenging task. Building on in-depth review and assessment of two popular graph neural network (GNN)-based regional epidemic…

Computation · Statistics 2025-11-20 Xiangxin Kong , Hang Wang , Yutong Li , Yanghao Chen , Zudi Lu

Generative network models play an important role in algorithm development, scaling studies, network analysis, and realistic system benchmarks for graph data sets. The commonly used graph-based benchmark model R-MAT has some drawbacks…

Data Structures and Algorithms · Computer Science 2016-07-01 Moritz von Looz , Mustafa Özdayi , Sören Laue , Henning Meyerhenke

Full-batch training on Graph Neural Networks (GNN) to learn the structure of large graphs is a critical problem that needs to scale to hundreds of compute nodes to be feasible. It is challenging due to large memory capacity and bandwidth…

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