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Spatial Transcriptomics (ST) merges the benefits of pathology images and gene expression, linking molecular profiles with tissue structure to analyze spot-level function comprehensively. Predicting gene expression from histology images is a…

Computer Vision and Pattern Recognition · Computer Science 2025-12-01 Chen Zhang , Yilu An , Ying Chen , Hao Li , Xitong Ling , Lihao Liu , Junjun He , Yuxiang Lin , Zihui Wang , Rongshan Yu

Pattern matching can be used to calculate the support of patterns, and is a key issue in sequential pattern mining (or sequence pattern mining). Nonoverlapping pattern matching means that two occurrences cannot use the same character in the…

Databases · Computer Science 2022-09-08 Youxi Wu , Bojing Jian , Yan Li , He Jiang , Xindong Wu

Text-attributed graphs are widely used across domains, offering rich opportunities for zero-shot learning via graph-text alignment. However, existing methods struggle with tasks requiring fine-grained pattern recognition, particularly on…

Machine Learning · Computer Science 2025-10-15 Heng Zhang , Tianyi Zhang , Zijun Liu , Yuling Shi , Yaomin Shen , Haochen You , Haichuan Hu , Lubin Gan , Jin Huang

Although it has been claimed in two different papers that the maximum cardinality cut problem is polynomial-time solvable for proper interval graphs, both of them turned out to be erroneous. In this paper, we give FPT algorithms for the…

Data Structures and Algorithms · Computer Science 2020-06-09 Arman Boyacı , Tınaz Ekim , Mordechai Shalom

Spectral clustering is sensitive to how graphs are constructed from data particularly when proximal and imbalanced clusters are present. We show that Ratio-Cut (RCut) or normalized cut (NCut) objectives are not tailored to imbalanced data…

Machine Learning · Statistics 2013-09-11 Jing Qian , Venkatesh Saligrama

Surface reconstruction from point clouds is a fundamental problem in the computer vision and graphics community. Recent state-of-the-arts solve this problem by individually optimizing each local implicit field during inference. Without…

Computer Vision and Pattern Recognition · Computer Science 2021-08-30 Jiapeng Tang , Jiabao Lei , Dan Xu , Feiying Ma , Kui Jia , Lei Zhang

Graph clustering is a fundamental problem that has been extensively studied both in theory and practice. The problem has been defined in several ways in literature and most of them have been proven to be NP-Hard. Due to their high practical…

Social and Information Networks · Computer Science 2012-03-27 Sumit Singh

Generalizability is an important problem in deep neural networks, especially in the context of the variability of data acquisition in clinical magnetic resonance imaging (MRI). Recently, the Spatially Localized Atlas Network Tiles (SLANT)…

Image and Video Processing · Electrical Eng. & Systems 2019-08-14 Camilo Bermudez , Justin Blaber , Samuel W. Remedios , Jess E. Reynolds , Catherine Lebel , Maureen McHugo , Stephan Heckers , Yuankai Huo , Bennett A. Landman

While a broad range of techniques have been proposed to tackle distribution shift, the simple baseline of training on an $\textit{undersampled}$ balanced dataset often achieves close to state-of-the-art-accuracy across several popular…

Machine Learning · Computer Science 2023-06-21 Niladri S. Chatterji , Saminul Haque , Tatsunori Hashimoto

This work proposes a new image analysis tool called Label Consistent Transform Learning (LCTL). Transform learning is a recent unsupervised representation learning approach; we add supervision by incorporating a label consistency…

Image and Video Processing · Electrical Eng. & Systems 2019-12-25 Jyoti Maggu , Hemant K. Aggarwal , Angshul Majumdar

Spectral clustering (SC) and graph-based semi-supervised learning (SSL) algorithms are sensitive to how graphs are constructed from data. In particular if the data has proximal and unbalanced clusters these algorithms can lead to poor…

Machine Learning · Statistics 2013-02-22 Jing Qian , Venkatesh Saligrama

In modern data science problems, techniques for extracting value from big data require performing large-scale optimization over heterogenous, irregularly structured data. Much of this data is best represented as multi-relational graphs,…

Artificial Intelligence · Computer Science 2014-06-10 Hui Miao , Xiangyang Liu , Bert Huang , Lise Getoor

The overlap graphs of subtrees in a tree (SOGs) generalise many other graphs classes with set representation characterisations. The complexity of recognising SOGs in open. The complexities of recognising many subclasses of SOGs are known.…

Computational Complexity · Computer Science 2022-02-04 Jessica Enright , Martin Pergel

Recently, network lasso has drawn many attentions due to its remarkable performance on simultaneous clustering and optimization. However, it usually suffers from the imperfect data (noise, missing values etc), and yields sub-optimal…

Machine Learning · Computer Science 2018-08-21 Yawei Zhao , Kai Xu , Xinwang Liu , En Zhu , Xinzhong Zhu , Jianping Yin

This paper is concerned with the problem of low rank plus sparse matrix decomposition for big data. Conventional algorithms for matrix decomposition use the entire data to extract the low-rank and sparse components, and are based on…

Numerical Analysis · Computer Science 2017-03-17 Mostafa Rahmani , George Atia

This paper studies Graphical SLOPE for precision matrix estimation, with emphasis on its ability to recover both sparsity and clusters of edges with equal or similar strength. In a fixed-dimensional regime, we establish that the root-$n$…

Statistics Theory · Mathematics 2026-04-15 Ivan Hejný , Giovanni Bonaccolto , Philipp Kremer , Sandra Paterlini , Małgorzata Bogdan , Jonas Wallin

Overlapping asymmetric datasets are common in data science and pose questions of how they can be incorporated together into a predictive analysis. In healthcare datasets there is often a small amount of information that is available for a…

Methodology · Statistics 2023-11-21 Matthew McTeer , Robin Henderson , Quentin M Anstee , Paolo Missier

Many well-known and effective anomaly detection methods assume that a reasonable decision boundary has a hypersphere shape, which however is difficult to obtain in practice and is not sufficiently compact, especially when the data are in…

Machine Learning · Computer Science 2024-05-07 Yunhe Zhang , Yan Sun , Jinyu Cai , Jicong Fan

This paper introduces a novel and distributed method for detecting inter-map loop closure outliers in simultaneous localization and mapping (SLAM). The proposed algorithm does not rely on a good initialization and can handle more than two…

Computer Vision and Pattern Recognition · Computer Science 2020-02-10 Arman Karimian , Ziqi Yang , Roberto Tron

Graph neural networks (GNNs) have shown promising performance in solving both Boolean satisfiability (SAT) and Maximum Satisfiability (MaxSAT) problems due to their ability to efficiently model and capture the structural dependencies…

Machine Learning · Computer Science 2025-04-17 Qiyue Chen , Shaolin Tan , Suixiang Gao , Jinhu Lü