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Clustering attempts to partition data instances into several distinctive groups, while the similarities among data belonging to the common partition can be principally reserved. Furthermore, incomplete data frequently occurs in many…

Machine Learning · Computer Science 2022-08-30 Miao Cheng , Xinge You

The algebraic properties of flattenings and subflattenings provide direct methods for identifying edges in the true phylogeny -- and by extension the complete tree -- using pattern counts from a sequence alignment. The relatively small…

Populations and Evolution · Quantitative Biology 2022-05-06 Joshua Stevenson , Barbara Holland , Michael Charleston , Jeremy Sumner

Metabolites, small molecules that are involved in cellular reactions, provide a direct functional signature of cellular state. Untargeted metabolomics experiments usually relies on tandem mass spectrometry to identify the thousands of…

Quantitative Methods · Quantitative Biology 2015-01-29 Kai Dührkop , Sebastian Böcker

I begin by summarizing key ideas of the paper under discussion. Then I will talk about a graphical modeling perspective, posterior contraction rates and alternative methods of aggregation. Moreover, I will also discuss possible applications…

Other Statistics · Statistics 2018-07-02 William Weimin Yoo

Write-optimized dictionaries are a class of cache-efficient data structures that buffer updates and apply them in batches to optimize the amortized cache misses per update. For example, a B^epsilon tree inserts updates as messages at the…

Data Structures and Algorithms · Computer Science 2024-04-29 Christopher Chung , William Jannen , Samuel McCauley , Bertrand Simon

We introduce the lazy search tree data structure. The lazy search tree is a comparison-based data structure on the pointer machine that supports order-based operations such as rank, select, membership, predecessor, successor, minimum, and…

Data Structures and Algorithms · Computer Science 2020-10-20 Bryce Sandlund , Sebastian Wild

Federated learning has emerged as a promising distributed learning paradigm that facilitates collaborative learning among multiple parties without transferring raw data. However, most existing federated learning studies focus on either…

Machine Learning · Computer Science 2024-05-01 Qinbin Li , Chulin Xie , Xiaojun Xu , Xiaoyuan Liu , Ce Zhang , Bo Li , Bingsheng He , Dawn Song

Distributed systems can be found in various applications, e.g., in robotics or autonomous driving, to achieve higher flexibility and robustness. Thereby, data flow centric applications such as Deep Neural Network (DNN) inference benefit…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-14 Fabian Kreß , El Mahdi El Annabi , Tim Hotfilter , Julian Hoefer , Tanja Harbaum , Juergen Becker

We consider a variant of treewidth that we call clique-partitioned treewidth in which each bag is partitioned into cliques. This is motivated by the recent development of FPT-algorithms based on similar parameters for various problems. With…

Data Structures and Algorithms · Computer Science 2023-02-20 Thomas Bläsius , Maximilian Katzmann , Marcus Wilhelm

Clustering is an important data mining technique that groups similar data records, recently categorical transaction clustering is received more attention. In this research, we study the problem of categorical data clustering for…

Databases · Computer Science 2017-05-03 Mahmoud Mahdi , Samir Abdelrahman , Reem Bahgat , Ismail Ismail

Assessing where and how information is stored in biological networks (such as neuronal and genetic networks) is a central task both in neuroscience and in molecular genetics, but most available tools focus on the network's structure as…

Information Theory · Computer Science 2023-02-24 Clifford Bohm , Douglas Kirkpatrick , Victoria Cao , Christoph Adami

Inference over large-scale foundation models within heterogeneous edge environments necessitates a fundamentally reconfigurable orchestration substrate. Static partitioning of model layers presumes temporal stability across compute and…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-09 Aladin Djuhera , Fernando Koch , Alecio Binotto

We investigate the problem of active learning on a given tree whose nodes are assigned binary labels in an adversarial way. Inspired by recent results by Guillory and Bilmes, we characterize (up to constant factors) the optimal placement of…

Machine Learning · Computer Science 2013-01-23 Nicolo Cesa-Bianchi , Claudio Gentile , Fabio Vitale , Giovanni Zappella

A central challenge in scaling up explicit state-space search for large tasks is compactly representing the set of generated states. Tree databases, a data structure from model checking, require constant space per generated state in the…

Artificial Intelligence · Computer Science 2025-11-18 Oliver Joergensen , Dominik Drexler , Jendrik Seipp

Graph classes of bounded tree rank were introduced recently in the context of the model checking problem for first-order logic of graphs. These graph classes are a common generalization of graph classes of bounded degree and bounded…

Discrete Mathematics · Computer Science 2025-10-08 Jakub Gajarský , Rose McCarty

The rapid growth of big spatial data urged the research community to develop several big spatial data systems. Regardless of their architecture, one of the fundamental requirements of all these systems is to spatially partition the data…

Databases · Computer Science 2020-07-24 Tin Vu , Ahmed Eldawy

In a supercritical branching particle system, the trimmed tree consists of those particles which have descendants at all times. We develop this concept in the superprocess setting. For a class of continuous superprocesses with Feller…

Probability · Mathematics 2007-05-23 Klaus Fleischmann , Jan M. Swart

Learning a Bayesian networks with bounded treewidth is important for reducing the complexity of the inferences. We present a novel anytime algorithm (k-MAX) method for this task, which scales up to thousands of variables. Through extensive…

Artificial Intelligence · Computer Science 2018-02-08 Mauro Scanagatta , Giorgio Corani , Marco Zaffalon , Jaemin Yoo , U Kang

Balanced partitioning is often a crucial first step in solving large-scale graph optimization problems, e.g., in some cases, a big graph can be chopped into pieces that fit on one machine to be processed independently before stitching the…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-12-10 Kevin Aydin , MohammadHossein Bateni , Vahab Mirrokni

Spectral clustering views the similarity matrix as a weighted graph, and partitions the data by minimizing a graph-cut loss. Since it minimizes the across-cluster similarity, there is no need to model the distribution within each cluster.…

Methodology · Statistics 2023-04-14 Leo L. Duan , Arkaprava Roy
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