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Chemical reaction networks describe interactions between biochemical species. Once an underlying reaction network is given for a biochemical system, the system dynamics can be modelled with various mathematical frameworks such as continuous…

Probability · Mathematics 2023-06-22 German Enciso , Radek Erban , Jinsu Kim

Molecular Communications (MC) is a bio-inspired communication technique that uses molecules to encode and transfer information. Many efforts have been devoted to developing novel modulation techniques for MC based on various distinguishable…

Emerging Technologies · Computer Science 2023-02-22 M. Okan Araz , Ahmet R. Emirdagi , M. Serkan Kopuzlu , Murat Kuscu

Data transmission rate in molecular communication systems can be improved by using multiple transmitters and receivers. In molecular multiple-input multiple-output (MIMO) systems which use only single type of molecules, the performance at…

Information Theory · Computer Science 2019-04-23 Nithin V. Sabu , Neeraj Varshney , Abhishek K. Gupta

Spectrum shortage is a fundamental problem in wireless networks and this problem becomes increasingly acute with the rapid proliferation of wireless devices. To address this problem, spectrum sharing in the context of cognitive radio…

Networking and Internet Architecture · Computer Science 2019-05-28 Pedram Kheirkhah Sangdeh , Hossein Pirayesh , Adnan Quadri , Huacheng Zeng

Distributed hardware of acoustic sensor networks bears inconsistency of local sampling frequencies, which is detrimental to signal processing. Fundamentally, sampling rate offset (SRO) nonlinearly relates the discrete-time signals acquired…

Audio and Speech Processing · Electrical Eng. & Systems 2021-05-31 Aleksej Chinaev , Sven Wienand , Gerald Enzner

Diffusion-based Molecular Communication (MC) is inherently challenged by severe inter-symbol interference (ISI). This is significantly amplified in mobile scenarios, where the channel impulse response (CIR) becomes time-varying and…

Emerging Technologies · Computer Science 2025-11-13 Abdulkadir Bilge , Eren Akyol , Murat Kuscu

Well-mixed chemical reaction networks (CRNs) contain many distinct chemical species with copy numbers that fluctuate in correlated ways. While those correlations are typically monitored via Monte Carlo sampling of stochastic trajectories,…

Statistical Mechanics · Physics 2026-01-14 John P. Zima , Schuyler B. Nicholson , Todd R. Gingrich

Reconfigurable intelligent surface (RIS) technology enhances wireless communication performance, but it also introduces new vulnerabilities that can be exploited by adversaries. This paper investigates channel reciprocity attack (CRACK)…

Signal Processing · Electrical Eng. & Systems 2025-09-16 Haoyu Wang , Jiawei Hu , Jiaqi Xu , Ying Ju , A. Lee Swindlehurst

The concept of Wireless Network-on-Chip (WNoC) has emerged as a potential solution to address the escalating communication demands of modern computing systems due to its low-latency, versatility, and reconfigurability. However, for WNoC to…

We propose a novel Markov chain Monte-Carlo (MCMC) method for reverse engineering the topological structure of stochastic reaction networks, a notoriously challenging problem that is relevant in many modern areas of research, like…

Methodology · Statistics 2018-10-08 Daniel F. Linder , Grzegorz A. Rempala

This paper studies stochastic aperiodic stabilization of a networked control system (NCS) consisting of a continuous-time plant and a discrete-time controller. The plant and the controller are assumed to be connected by communication…

Systems and Control · Electrical Eng. & Systems 2022-03-08 Yohei Hosoe

Joint source-channel coding (JSCC) is a promising paradigm for next-generation communication systems, particularly in challenging transmission environments. In this paper, we propose a novel standard-compatible JSCC framework for the…

Information Theory · Computer Science 2025-01-07 Xue Han , Yongpeng Wu , Zhen Gao , Biqian Feng , Yuxuan Shi , Deniz Gündüz , Wenjun Zhang

The aim of this paper is to reveal the importance of hybrid successive interference cancellation (SIC) and power adaptation (PA) for improving transmission robustness of uplink non-orthogonal multiple access (NOMA). Particularly, a…

Information Theory · Computer Science 2023-07-11 Yanshi Sun , Wei Cao , Momiao Zhou , Zhiguo Ding

The Turing completeness result for continuous chemical reaction networks (CRN) shows that any computable function over the real numbers can be computed by a CRN over a finite set of formal molecular species using at most bimolecular…

Quantitative Methods · Quantitative Biology 2021-07-01 Mathieu Hemery , François Fages , Sylvain Soliman

Wireless Network-on-Chip (WNoC) has been proposed as a low-latency, versatile, and broadcast-capable complement to current interconnects in the quest for satisfying the ever-increasing communications needs of modern computing systems.…

Nonlinear self-interference cancellation (SIC) is essential for full-duplex communication systems, which can offer twice the spectral efficiency of traditional half-duplex systems. The challenge of nonlinear SIC is similar to the classic…

Signal Processing · Electrical Eng. & Systems 2024-03-19 Hyowon Lee , Jungyeon Kim , Geon Choi , Ian P. Roberts , Jinseok Choi , Namyoon Lee

In this paper, we present an analytical model for the diffusive molecular communication (MC) system with a reversible adsorption receiver in a fluid environment. The widely used concentration shift keying (CSK) is considered for modulation.…

Emerging Technologies · Computer Science 2016-06-23 Yansha Deng , Adam Noel , Maged Elkashlan , Arumugam Nallanathan , Karen C. Cheung

Chemical reaction networks are widely used to model stochastic dynamics in chemical kinetics, systems biology and epidemiology. Solving the chemical master equation that governs these systems poses a significant challenge due to the large…

Molecular Networks · Quantitative Biology 2025-12-16 Jiayu Weng , Xinyi Zhu , Jing Liu , Linyuan Lü , Pan Zhang , Ying Tang

Biochemical networks are used in computational biology, to model the static and dynamical details of systems involved in cell signaling, metabolism, and regulation of gene expression. Parametric and structural uncertainty, as well as…

Molecular Networks · Quantitative Biology 2014-10-15 Ovidiu Radulescu , Alexander N. Gorban , Andrei Zinovyev , Vincent Noel

Stochastic reaction network models are often used to explain and predict the dynamics of gene regulation in single cells. These models usually involve several parameters, such as the kinetic rates of chemical reactions, that are not…

Computation · Statistics 2020-01-07 Thomas A. Catanach , Huy D. Vo , Brian Munsky
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