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Bayesian inference can be embedded into an appropriately defined dynamics in the space of probability measures. In this paper, we take Brownian motion and its associated Fokker--Planck equation as a starting point for such embeddings and…

Numerical Analysis · Mathematics 2021-02-09 Sebastian Reich , Simon Weissmann

Two-body interactions of elementary particles are useful in particle and nuclear physics to describe qualitatively and quantitatively few- and many-body systems. We are extending for this purpose the quantum inversion approach for systems…

Nuclear Theory · Physics 2016-09-08 M. Sander , H. V. von Geramb

We present a promising coarse-graining strategy for linking micro- and mesoscales of soft matter systems. The approach is based on effective pairwise interaction potentials obtained from detailed atomistic molecular dynamics (MD)…

Soft Condensed Matter · Physics 2007-05-23 A. P. Lyubartsev , M. Karttunen , I. Vattulainen , A. Laaksonen

A purely numerical method, Direct ComputationMethod is applied to evaluate Feynman integrals. This method is based on the combination of an efficient numerical integration and an efficient extrapolation. In addition, high-precision…

High Energy Physics - Phenomenology · Physics 2014-11-18 F. Yuasa , T. Ishikawa , J. Fujimoto , N. Hamaguchi , E. de Doncker , Y. Shimizu

In this work we define single-particle potentials for a positron and a positronium atom interacting with light atoms (H, He, Li and Be) by inverting a single-particle Schr\"odinger equation. For this purpose, we use accurate energies and…

Atomic and Molecular Clusters · Physics 2014-05-21 A. Zubiaga , F. Tuomisto , M. Puska

We derive and describe a very accurate variational scheme for the ground state of the system of a few ultra-cold bosons confined in one-dimensional traps of arbitrary shapes. It is based on assumption that all inter-particle correlations…

Quantum Gases · Physics 2021-06-24 Przemysław Kościk , Arkadiusz Kuroś , Adam Pieprzycki , Tomasz Sowiński

The electrostatic potential in the neighborhood of a biomolecule can be computed thanks to the non-linear divergence-form elliptic Poisson-Boltzmann PDE. Dedicated Monte-Carlo methods have been developed to solve its linearized version (see…

Numerical Analysis · Mathematics 2016-11-15 Mireille Bossy , Nicolas Champagnat , Helene Leman , Sylvain Maire , Laurent Violeau , Mariette Yvinec

We outline a machine learning strategy for determining the effective interaction in the condensed phases of matter using scattering. Via a case study of colloidal suspensions, we showed that the effective potential can be probabilistically…

Soft Condensed Matter · Physics 2021-03-30 Chi-Huan Tung , Shou-Yi Chang , Jan-Michael Carrillo , Bobby G. Sumpter , Changwoo Do , Wei-Ren Chen

The simulation of geometrically resolved rigid particles in a fluid relies on coupling algorithms to transfer momentum both ways between the particles and the fluid. In this article, the fluid flow is modeled with a parallel Lattice…

Fluid Dynamics · Physics 2021-03-22 Lukas Werner , Christoph Rettinger , Ulrich Rüde

We investigate the potential of a quantum Boltzmann equation without momentum conservation for description of strongly correlated electron systems out of equilibrium. In a spirit similar to dynamical mean field theory (DMFT), the momentum…

Strongly Correlated Electrons · Physics 2018-11-07 Michael Wais , Martin Eckstein , Roland Fischer , Philipp Werner , Marco Battiato , Karsten Held

We study a linearly transformed particle method for the aggregation equation with smooth or singular interaction forces. For the smooth interaction forces, we provide convergence estimates in $L^1$ and $L^\infty$ norms depending on the…

Numerical Analysis · Mathematics 2015-07-28 Martin Campos Pinto , José A. Carrillo , Frédérique Charles , Young-Pil Choi

Coulomb interaction, following an inverse-square force-law, quantifies the amount of force between two stationary and electrically charged particles. The long-range nature of Coulomb interactions poses a major challenge to molecular…

Computational Physics · Physics 2022-01-26 Jiuyang Liang , Pan Tan , Yue Zhao , Lei Li , Shi Jin , Liang Hong , Zhenli Xu

The Boltzmann equation is a powerful theoretical tool for modeling the collective dynamics of quantum many-body systems subject to external perturbations. Analysis of the equation gives access to linear response properties including…

The system-level dynamics of multivalent biomolecular interactions can be simulated using a rule-based kinetic Monte Carlo method in which a rejection sampling strategy is used to generate reaction events. This method becomes inefficient…

Quantitative Methods · Quantitative Biology 2010-03-04 Jin Yang , William S. Hlavacek

The symmetrization postulate in quantum mechanics is formally reflected in the appearance of an exchange phase ruling the symmetry of identical particle global states under particle swapping. Many indirect measurements of this fundamental…

We consider a discrete particle system of two species coupled through nonlocal interactions driven by the one-dimensional Newtonian potential, with repulsive self-interaction and attractive cross-interaction. After providing a suitable…

Analysis of PDEs · Mathematics 2020-08-26 Marco Di Francesco , Antonio Esposito , Markus Schmidtchen

We propose a Hermite spectral method for the spatially inhomogeneous Boltzmann equation. For the inverse-power-law model, we generalize an approximate quadratic collision operator defined in the normalized and dimensionless setting to an…

Spectral Theory · Mathematics 2019-02-26 Zhicheng Hu , Zhenning Cai , Yanli Wang

Electrostatic correlations and fluctuations in ionic systems can be described within an extended Poisson-Boltzmann theory using a Gaussian variational form. The resulting equations are challenging to solve because they require the solution…

Computational Physics · Physics 2015-06-17 Zhenli Xu , A. C. Maggs

A simple "trick" is proposed, which allows to perform exactly the site-averaging procedure required when developing integral equation theories of interaction site models of macromolecular fluids. It shows that no approximation is involved…

Soft Condensed Matter · Physics 2007-05-23 V. Krakoviack

A coarse-graining strategy, previously developed for polymer solutions, is extended here to mixtures of linear polymers and hard-sphere colloids. In this approach groups of monomers are mapped onto a single pseudoatom (a blob) and the…

Soft Condensed Matter · Physics 2015-01-07 Giuseppe D'Adamo , Andrea Pelissetto , Carlo Pierleoni