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Molecules have seemed like a natural fit to deep learning's tendency to handle a complex structure through representation learning, given enough data. However, this often continuous representation is not natural for understanding chemical…

Machine Learning · Computer Science 2021-03-12 Austin Clyde , Arvind Ramanathan , Rick Stevens

Data users need relevant context and research expertise to effectively search for and identify relevant datasets. Leading data providers, such as the Inter-university Consortium for Political and Social Research (ICPSR), offer standardized…

Information Retrieval · Computer Science 2023-05-31 Lizhou Fan , Sara Lafia , Lingyao Li , Fangyuan Yang , Libby Hemphill

Earth system science is producing increasingly large, high-dimensional datasets from physics based Earth system models to AI-based weather and climate models. Embedding-based representations can make these data searchable through similarity…

Data Analysis, Statistics and Probability · Physics 2026-05-05 Nihanth W. Cherukuru , Matt Rehme , Kirsten J. Mayer , David John Gagne , John Schreck , John Clyne , Charlie Becker

Widespread adoption of high-temperature polymer electrolyte membrane fuel cells (HT-PEMFCs) and HT-PEM electrochemical hydrogen pumps (HT-PEM ECHPs) requires models and computational tools that provide accurate scale-up and optimization.…

Machine Learning · Computer Science 2022-03-01 Luis A. Briceno-Mena , Christopher G. Arges , Jose A. Romagnoli

The Visual Physics Analysis (VISPA) project defines a toolbox for accessing software via the web. It is based on latest web technologies and provides a powerful extension mechanism that enables to interface a wide range of applications.…

Discovery of new knowledge is increasingly data-driven, predicated on a team's ability to collaboratively create, find, analyze, retrieve, and share pertinent datasets over the duration of an investigation. This is especially true in the…

Human-Computer Interaction · Computer Science 2021-10-06 Hongsuda Tangmunarunkit , Aref Shafaeibejestan , Joshua Chudy , Karl Czajkowski , Robert Schuler , Carl Kesselman

Filtergraph is a web application being developed by the Vanderbilt Initiative in Data-intensive Astrophysics (VIDA) to flexibly handle a large variety of astronomy datasets. While current datasets at Vanderbilt are being used to search for…

Instrumentation and Methods for Astrophysics · Physics 2012-12-21 Dan Burger , Keivan G. Stassun , Joshua Pepper , Robert J. Siverd , Martin A. Paegert , Nathan M. De Lee

Quantum-chemical subsystem and embedding methods require complex workflows that may involve multiple quantum-chemical program packages. Moreover, such workflows require the exchange of voluminous data that goes beyond simple quantities such…

Deep learning has advanced efficient chemical process simulations on the surfaces, accelerating high-throughput materials screening and rational design in heterogeneous catalysis, energy storage and conversion, and gas separation. However,…

Disordered Systems and Neural Networks · Physics 2026-03-12 Zhihao Zhang , Xiao-Ming Cao

Data engineering pipelines are essential - albeit costly - components of predictive analytics frameworks requiring significant engineering time and domain expertise for carrying out tasks such as data ingestion, preprocessing, feature…

Machine Learning · Computer Science 2025-05-22 Iman Kazemian , Paritosh Ramanan , Murat Yildirim

We present Firefly, a new browser-based interactive tool for visualizing 3D particle data sets. On a typical personal computer, Firefly can simultaneously render and enable real-time interactions with > ~10 million particles, and can…

Instrumentation and Methods for Astrophysics · Physics 2023-07-24 Alexander B. Gurvich , Aaron M. Geller

The emergence of data-driven computational materials science offers unprecedented opportunities to explore complex material landscapes, complementing experimental research with the discovery of novel compounds. To enable these developments,…

Materials Science · Physics 2026-04-30 Holger-Dietrich Saßnick , Joshua Edzards , Timo Reents , Caterina Cocchi

We present a generalized version of the ITIM algorithm for the identification of interfacial molecules, which is able to treat arbitrarily shaped interfaces. The algorithm exploits the similarities between the concept of probe sphere used…

Soft Condensed Matter · Physics 2012-10-11 Marcello Sega , Sofia Kantorovich , Pál Jedlovszky , Miguel Jorge

Thorough analysis of local droplet-level interactions is crucial to better understand the microphysical processes in clouds and their effect on the global climate. High-accuracy simulations of relevant droplet size distributions from Large…

The urgency of the energy transition requires improving the performance and longevity of hydrogen technologies. AlphaPEM is a dynamic one-dimensional (1D) physics-based PEM fuel cell system simulator, programmed in Python and experimentally…

Systems and Control · Electrical Eng. & Systems 2026-01-28 Raphaël Gass , Zhongliang Li , Rachid Outbib , Samir Jemeï , Daniel Hissel

As interactive web-based geovisualization becomes increasingly vital across disciplines, there is a growing need for open-source frameworks that support dynamic, multi-attribute spatial analysis and accessible design. This paper introduces…

Human-Computer Interaction · Computer Science 2025-09-10 Sarigai Sarigai , Liping Yang , Katie Slack , Carolyn Fish , Michaela Buenemann , Qiusheng Wu , Yan Lin , Joseph A. Cook , David Jacobs

In this paper we present a novel interactive multimodal learning system, which facilitates search and exploration in large networks of social multimedia users. It allows the analyst to identify and select users of interest, and to find…

Information Retrieval · Computer Science 2019-05-08 Iva Gornishka , Stevan Rudinac , Marcel Worring

Scientists studying deep ocean microbial ecosystems use limited numbers of sediment samples collected from the seafloor to characterize important life-sustaining biogeochemical cycles in the environment. Yet conducting fieldwork to sample…

The scientific community use PDEs to model a range of problems. The people in this domain are interested in visualizing their results, but existing mechanisms for visualization can not handle the full richness of computations in the domain.…

Human-Computer Interaction · Computer Science 2017-06-20 Charisee Chiw , Gordon Kindlmann , John Reppy

Diffusion models have been central to the development of recent image, video, and even text generation systems. They posses striking geometric properties that can be faithfully portrayed in low-dimensional settings. However, existing…

Machine Learning · Computer Science 2025-07-08 Alec Helbling , Duen Horng Chau