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Generative modeling within constrained sets is essential for scientific and engineering applications involving physical, geometric, or safety requirements (e.g., molecular generation, robotics). We present a unified framework for…

Machine Learning · Computer Science 2026-04-21 Kijung Jeon , Michael Muehlebach , Molei Tao

Unsupervised Anomaly Detection (UAD) methods aim to identify anomalies in test samples comparing them with a normative distribution learned from a dataset known to be anomaly-free. Approaches based on generative models offer…

Computer Vision and Pattern Recognition · Computer Science 2024-07-10 Sergio Naval Marimont , Vasilis Siomos , Matthew Baugh , Christos Tzelepis , Bernhard Kainz , Giacomo Tarroni

Cryogenic electron microscopy (cryo-EM) provides a unique opportunity to study the structural heterogeneity of biomolecules. Being able to explain this heterogeneity with atomic models would help our understanding of their functional…

The gradual nature of a diffusion process that synthesizes samples in small increments constitutes a key ingredient of Denoising Diffusion Probabilistic Models (DDPM), which have presented unprecedented quality in image synthesis and been…

Computer Vision and Pattern Recognition · Computer Science 2023-08-01 Zihan Zhang , Richard Liu , Kfir Aberman , Rana Hanocka

Cryo-EM reconstruction algorithms seek to determine a molecule's 3D density map from a series of noisy, unlabeled 2D projection images captured with an electron microscope. Although reconstruction algorithms typically model the 3D volume as…

Biomolecules · Quantitative Biology 2021-07-06 Ellen D. Zhong , Adam Lerer , Joseph H. Davis , Bonnie Berger

The rapid advancement of Artificial Intelligence (AI) in biomedical imaging and radiotherapy is hindered by the limited availability of large imaging data repositories. With recent research and improvements in denoising diffusion…

Image and Video Processing · Electrical Eng. & Systems 2024-03-27 Rowan Bradbury , Katherine A. Vallis , Bartlomiej W. Papiez

Time series forecasting has been a widely explored task of great importance in many applications. However, it is common that real-world time series data are recorded in a short time period, which results in a big gap between the deep model…

Machine Learning · Computer Science 2023-01-10 Yan Li , Xinjiang Lu , Yaqing Wang , Dejing Dou

Diffusion models have revolutionized generative AI, with their inherent capacity to generate highly realistic state-of-the-art synthetic data. However, these models employ an iterative denoising process over computationally intensive layers…

Hardware Architecture · Computer Science 2026-03-10 Tharini Suresh , Salma Afifi , Sudeep Pasricha

Generative diffusion models have achieved remarkable success in producing high-quality images. However, these models typically operate in continuous intensity spaces, diffusing independently across pixels and color channels. As a result,…

Graphics · Computer Science 2025-05-20 Javier E. Santos , Agnese Marcato , Roman Colman , Nicholas Lubbers , Yen Ting Lin

Protein design with desirable properties has been a significant challenge for many decades. Generative artificial intelligence is a promising approach and has achieved great success in various protein generation tasks. Notably, diffusion…

Predicting low-energy molecular conformations given a molecular graph is an important but challenging task in computational drug discovery. Existing state-of-the-art approaches either resort to large scale transformer-based models that…

Quantitative Methods · Quantitative Biology 2024-10-31 Majdi Hassan , Nikhil Shenoy , Jungyoon Lee , Hannes Stark , Stephan Thaler , Dominique Beaini

Real-time semantic segmentation plays an important role in practical applications such as self-driving and robots. Most semantic segmentation research focuses on improving estimation accuracy with little consideration on efficiency. Several…

Computer Vision and Pattern Recognition · Computer Science 2020-01-01 Shao-Yuan Lo , Hsueh-Ming Hang , Sheng-Wei Chan , Jing-Jhih Lin

Diffusion generative models synthesize samples by discretizing reverse-time dynamics driven by a learned score (or denoiser). Existing convergence analyses of diffusion models typically scale at least linearly with the ambient dimension,…

Machine Learning · Computer Science 2026-01-30 Ahmad Aghapour , Erhan Bayraktar , Ziqing Zhang

Classical diffusion models typically rely on isotropic Gaussian noise, treating all regions uniformly and overlooking structural information important for high-quality generation. We introduce an edge-preserving diffusion process that…

Computer Vision and Pattern Recognition · Computer Science 2026-04-17 Jente Vandersanden , Sascha Holl , Xingchang Huang , Gurprit Singh

3D anomaly detection plays a crucial role in monitoring parts for localized inherent defects in precision manufacturing. Embedding-based and reconstruction-based approaches are among the most popular and successful methods. However, there…

Computer Vision and Pattern Recognition · Computer Science 2024-07-16 Zheyuan Zhou , Le Wang , Naiyu Fang , Zili Wang , Lemiao Qiu , Shuyou Zhang

Federated Learning (FL) has achieved significant achievements recently, enabling collaborative model training on distributed data over edge devices. Iterative gradient or model exchanges between devices and the centralized server in the…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-12-19 Ji Liu , Tianshi Che , Yang Zhou , Ruoming Jin , Huaiyu Dai , Dejing Dou , Patrick Valduriez

Most recent unsupervised non-rigid 3D shape matching methods are based on the functional map framework due to its efficiency and superior performance. Nevertheless, respective methods struggle to obtain spatially smooth pointwise…

Computer Vision and Pattern Recognition · Computer Science 2024-07-12 Dongliang Cao , Zorah Laehner , Florian Bernard

Human organs constantly undergo anatomical changes due to a complex mix of short-term (e.g., heartbeat) and long-term (e.g., aging) factors. Evidently, prior knowledge of these factors will be beneficial when modeling their future state,…

Computer Vision and Pattern Recognition · Computer Science 2023-06-19 Jee Seok Yoon , Chenghao Zhang , Heung-Il Suk , Jia Guo , Xiaoxiao Li

We consider unsupervised cell nuclei segmentation in this paper. Exploiting the recently-proposed unpaired image-to-image translation between cell nuclei images and randomly synthetic masks, existing approaches, e.g., CycleGAN, have…

Image and Video Processing · Electrical Eng. & Systems 2022-03-11 Kai Yao , Kaizhu Huang , Jie Sun , Curran Jude

Graph diffusion models, dominant in graph generative modeling, remain underexplored for graph-to-graph translation tasks like chemical reaction prediction. We demonstrate that standard permutation equivariant denoisers face fundamental…

Machine Learning · Computer Science 2025-06-10 Najwa Laabid , Severi Rissanen , Markus Heinonen , Arno Solin , Vikas Garg
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