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Is there really much more to say about sparse autoencoders (SAEs)? Autoencoders in general, and SAEs in particular, represent deep architectures that are capable of modeling low-dimensional latent structure in data. Such structure could…

Machine Learning · Computer Science 2025-06-09 Yin Lu , Xuening Zhu , Tong He , David Wipf

Sparse autoencoders (SAEs) have become central to mechanistic interpretability, decomposing transformer activations into monosemantic features. Yet existing analyses characterise features almost exclusively through top-activating token…

Artificial Intelligence · Computer Science 2026-05-08 Ruben Fernandez-Boullon , Pablo Magariños-Docampo , Javier Perez-Robles

Sparse autoencoders (SAEs) have recently emerged as a powerful tool for interpreting the features learned by large language models (LLMs). By reconstructing features with sparsely activated networks, SAEs aim to recover complex superposed…

Machine Learning · Computer Science 2026-03-05 Jingyi Cui , Qi Zhang , Yifei Wang , Yisen Wang

We study the challenge of achieving theoretically grounded feature recovery using Sparse Autoencoders (SAEs) for the interpretation of Large Language Models. Existing SAE training algorithms often lack rigorous mathematical guarantees and…

Machine Learning · Computer Science 2025-06-18 Siyu Chen , Heejune Sheen , Xuyuan Xiong , Tianhao Wang , Zhuoran Yang

While vision models are highly capable, their internal mechanisms remain poorly understood -- a challenge which sparse autoencoders (SAEs) have helped address in language, but which remains underexplored in vision. We address this gap by…

Computer Vision and Pattern Recognition · Computer Science 2025-04-14 Sonia Joseph , Praneet Suresh , Ethan Goldfarb , Lorenz Hufe , Yossi Gandelsman , Robert Graham , Danilo Bzdok , Wojciech Samek , Blake Aaron Richards

Motivated by the hypothesis that neural network representations encode abstract, interpretable features as linearly accessible, approximately orthogonal directions, sparse autoencoders (SAEs) have become a popular tool in interpretability.…

Machine Learning · Computer Science 2025-11-05 Valérie Costa , Thomas Fel , Ekdeep Singh Lubana , Bahareh Tolooshams , Demba Ba

Sparse autoencoders (SAEs) are used to analyze embeddings, but their role and practical value are debated. We propose a new perspective on SAEs by demonstrating that they can be naturally understood as topic models. We propose a continuous…

Computer Vision and Pattern Recognition · Computer Science 2026-05-19 Leander Girrbach , Zeynep Akata

Sparse autoencoders (SAEs) are a recent technique for decomposing neural network activations into human-interpretable features. However, in order for SAEs to identify all features represented in frontier models, it will be necessary to…

Machine Learning · Computer Science 2025-06-04 Anish Mudide , Joshua Engels , Eric J. Michaud , Max Tegmark , Christian Schroeder de Witt

Multilingual language models (LMs) organize representations for typologically and orthographically diverse languages into a shared parameter space, yet the nature of this internal organization remains elusive. In this work, we investigate…

Computation and Language · Computer Science 2026-04-22 Aastha A K Verma , Anwoy Chatterjee , Mehak Gupta , Tanmoy Chakraborty

Sparse Autoencoders (SAEs) have been successfully used to probe Large Language Models (LLMs) and extract interpretable concepts from their internal representations. These concepts are linear combinations of neuron activations that…

Computation and Language · Computer Science 2026-02-23 Mathis Le Bail , Jérémie Dentan , Davide Buscaldi , Sonia Vanier

Integrating compositional and symbolic properties into current distributional semantic spaces can enhance the interpretability, controllability, compositionality, and generalisation capabilities of Transformer-based auto-regressive language…

Computation and Language · Computer Science 2026-04-16 Yingji Zhang , Danilo S. Carvalho , André Freitas

In this work, we demonstrate that affine mappings between residual streams of language models is a cheap way to effectively transfer represented features between models. We apply this technique to transfer the weights of Sparse Autoencoders…

Computation and Language · Computer Science 2025-11-04 Alan Chen , Jack Merullo , Alessandro Stolfo , Ellie Pavlick

Sparse autoencoders (SAEs) are a promising approach for uncovering interpretable features in large language models (LLMs). While several automated evaluation methods exist for SAEs, most rely on external LLMs. In this work, we introduce…

Computation and Language · Computer Science 2025-09-30 Alex Gulko , Yusen Peng , Sachin Kumar

EEG foundation models achieve state-of-the-art clinical performance, yet the internal computations driving their predictions remain opaque: a barrier to clinical trust. We apply TopK Sparse Autoencoders (SAEs) across three architecturally…

A recent line of work has shown promise in using sparse autoencoders (SAEs) to uncover interpretable features in neural network representations. However, the simple linear-nonlinear encoding mechanism in SAEs limits their ability to perform…

Machine Learning · Computer Science 2025-01-31 Charles O'Neill , Alim Gumran , David Klindt

We investigate whether sparse autoencoders (SAEs) can be used to remove knowledge from language models. We use the biology subset of the Weapons of Mass Destruction Proxy dataset and test on the gemma-2b-it and gemma-2-2b-it language…

Machine Learning · Computer Science 2024-11-05 Eoin Farrell , Yeu-Tong Lau , Arthur Conmy

Deep learning, particularly with the advancement of Large Language Models, has transformed biomolecular modeling, with protein language models such as ESM inspiring emerging RNA language models such as RiNALMo. Recent work has begun…

Biomolecules · Quantitative Biology 2026-05-18 Taehan Kim , Sangdae Nam

Sparse Autoencoders (SAEs) are a prominent tool in mechanistic interpretability (MI) for decomposing neural network activations into interpretable features. However, the aspiration to identify a canonical set of features is challenged by…

Machine Learning · Computer Science 2025-05-27 Xiangchen Song , Aashiq Muhamed , Yujia Zheng , Lingjing Kong , Zeyu Tang , Mona T. Diab , Virginia Smith , Kun Zhang

Sparse autoencoders (SAEs) are commonly used to interpret the internal activations of large language models (LLMs) by mapping them to human-interpretable concept representations. While existing evaluations of SAEs focus on metrics such as…

Machine Learning · Computer Science 2026-01-26 Aaron J. Li , Suraj Srinivas , Usha Bhalla , Himabindu Lakkaraju

Sparse Autoencoders (SAEs) are an interpretability technique aimed at decomposing neural network activations into interpretable units. However, a major bottleneck for SAE development has been the lack of high-quality performance metrics,…

Machine Learning · Computer Science 2024-12-02 Adam Karvonen , Can Rager , Samuel Marks , Neel Nanda
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