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Most protein families have fewer than 100 known members, a regime where deep generative models overfit or collapse. We propose stochastic attention (SA), a training-free sampler that treats the modern Hopfield energy over a protein…

Machine Learning · Computer Science 2026-03-17 Jeffrey D. Varner

Transformer-based scientific foundation models are increasingly deployed in high-stakes settings, but current architectures give deterministic outputs and provide limited support for calibrated predictive uncertainty. We propose Stochastic…

Machine Learning · Computer Science 2026-05-12 Akash Yadav , Taiwo A. Adebiyi , Ruda Zhang

We propose in this paper, STANLEY, a STochastic gradient ANisotropic LangEvin dYnamics, for sampling high dimensional data. With the growing efficacy and potential of Energy-Based modeling, also known as non-normalized probabilistic…

Machine Learning · Statistics 2023-10-20 Belhal Karimi , Jianwen Xie , Ping Li

We present a unified framework for the data-driven construction of stochastic reduced models with state-dependent memory for high-dimensional Hamiltonian systems. The method addresses two key challenges: (\rmnum{1}) accurately modeling…

Computational Physics · Physics 2025-09-10 Zhiyuan She , Liyao Lyu , Bryan Ronain Smith , Huan Lei

Transformer attention computes a single softmax-weighted average over values -- a one-pass estimate that cannot correct its own errors. We introduce \emph{gradient-boosted attention}, which applies the principle of gradient boosting…

Machine Learning · Computer Science 2026-05-05 Saleh Sargolzaei

We propose and analyze a new variation of the so-called {\em exponential Hopfield model}, a recently introduced family of associative neural networks with unprecedented storage capacity. Our construction is based on a cost function defined…

Disordered Systems and Neural Networks · Physics 2025-09-09 Linda Albanese , Andrea Alessandrelli , Adriano Barra , Peter Sollich

Recent research has established a connection between modern Hopfield networks (HNs) and transformer attention heads, with guarantees of exponential storage capacity. However, these models still face challenges scaling storage efficiently.…

Machine Learning · Computer Science 2025-04-11 Saul Santos , António Farinhas , Daniel C. McNamee , André F. T. Martins

We introduce the sparse modern Hopfield model as a sparse extension of the modern Hopfield model. Like its dense counterpart, the sparse modern Hopfield model equips a memory-retrieval dynamics whose one-step approximation corresponds to…

Machine Learning · Computer Science 2023-12-01 Jerry Yao-Chieh Hu , Donglin Yang , Dennis Wu , Chenwei Xu , Bo-Yu Chen , Han Liu

Recent studies have shown that synaptic unreliability is a robust and sufficient mechanism for inducing the stochasticity observed in cortex. Here, we introduce Synaptic Sampling Machines, a class of neural network models that uses synaptic…

Neural and Evolutionary Computing · Computer Science 2016-12-16 Emre O. Neftci , Bruno U. Pedroni , Siddharth Joshi , Maruan Al-Shedivat , Gert Cauwenberghs

Hopfield networks and Boltzmann machines (BMs) are fundamental energy-based neural network models. Recent studies on modern Hopfield networks have broaden the class of energy functions and led to a unified perspective on general Hopfield…

Machine Learning · Computer Science 2023-03-30 Toshihiro Ota , Ryo Karakida

In this work we propose an energy functional along the lines of Modern Hopfield Networks (MNH), the stationary points of which correspond to the attention due to Vaswani et al. [12], thus unifying both frameworks. The minima of this…

Machine Learning · Statistics 2025-06-16 Ahmed Farooq

We study how multi-head softmax attention models are trained to perform in-context learning on linear data. Through extensive empirical experiments and rigorous theoretical analysis, we demystify the emergence of elegant attention patterns:…

Machine Learning · Computer Science 2025-05-29 Jianliang He , Xintian Pan , Siyu Chen , Zhuoran Yang

Adaptive physical and biological systems continually process fluctuating information from their environments. When the environment is nonstationary, inference itself becomes a nonequilibrium process with thermodynamic cost. We analyse a…

Statistical Mechanics · Physics 2026-03-23 Aditya Gupta

Adaptive Langevin dynamics is a method for sampling the Boltzmann-Gibbs distribution at prescribed temperature in cases where the potential gradient is subject to stochastic perturbation of unknown magnitude. The method replaces the…

Probability · Mathematics 2023-11-14 Benedict Leimkuhler , Matthias Sachs , Gabriel Stoltz

Recently, there has been growing interest in collecting reasoning-intensive pretraining data to improve LLMs' complex reasoning ability. Prior approaches typically rely on supervised classifiers to identify such data, which requires…

Computation and Language · Computer Science 2025-05-13 Kai Hua , Steven Wu , Ge Zhang , Ke Shen

We consider the problem of sampling from a target distribution, which is \emph {not necessarily logconcave}, in the context of empirical risk minimization and stochastic optimization as presented in Raginsky et al. (2017). Non-asymptotic…

Statistics Theory · Mathematics 2021-02-03 Ngoc Huy Chau , Éric Moulines , Miklos Rásonyi , Sotirios Sabanis , Ying Zhang

Associative memory, a form of content-addressable memory, facilitates information storage and retrieval in many biological and physical systems. In statistical mechanics models, associative memory at equilibrium is represented through…

Disordered Systems and Neural Networks · Physics 2022-03-08 Agnish Kumar Behera , Madan Rao , Srikanth Sastry , Suriyanarayanan Vaikuntanathan

Transformers have proven highly effective across modalities, but standard softmax attention scales quadratically with sequence length, limiting long context modeling. Linear attention mitigates this by approximating attention with kernel…

Machine Learning · Computer Science 2026-02-10 Ashkan Shahbazi , Chayne Thrash , Yikun Bai , Keaton Hamm , Navid NaderiAlizadeh , Soheil Kolouri

We introduce a Hopfield-type associative memory in which effective connectivity is multiplicatively modulated by astrocytic gains evolving under an entropy-regularized replicator equation. The coupled neuron-astrocyte dynamics admit a…

Data Analysis, Statistics and Probability · Physics 2026-04-29 Arnau Vivet , Alex Arenas

Hybrid architectures combining state-space models with attention have achieved strong efficiency-quality tradeoffs, yet existing approaches either apply attention uniformly or learn static sparse patterns. This misses a key opportunity:…

Machine Learning · Computer Science 2026-02-13 Ibne Farabi Shihab , Sanjeda Akter , Anuj Sharma
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