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In recent years several compressed indexes based on variants of the Burrows-Wheeler transformation have been introduced. Some of these index structures far more complex than a single string, as was originally done with the FM-index…

Computational Complexity · Computer Science 2019-02-27 Daniel Gibney , Sharma V. Thankachan

Finding dense substructures in a graph is a fundamental graph mining operation, with applications in bioinformatics, social networks, and visualization to name a few. Yet most standard formulations of this problem (like clique, quasiclique,…

Social and Information Networks · Computer Science 2015-03-10 Ahmet Erdem Sariyuce , C. Seshadhri , Ali Pinar , Umit V. Catalyurek

A locally irregular graph is a graph whose adjacent vertices have distinct degrees, a regular graph is a graph where each vertex has the same degree and a locally regular graph is a graph where for every two adjacent vertices u, v, their…

Discrete Mathematics · Computer Science 2018-01-30 Arash Ahadi , Ali Dehghan , Mohammad-Reza Sadeghi , Brett Stevens

In 1992 Bir\'{o}, Hujter and Tuza introduced, for every fixed connected graph $H$, the class of $H$-graphs, defined as the intersection graphs of connected subgraphs of some subdivision of $H$. Recently, quite a lot of research has been…

Planar graphs can be represented as intersection graphs of different types of geometric objects in the plane, e.g., circles (Koebe, 1936), line segments (Chalopin \& Gon{\c{c}}alves, 2009), \textsc{L}-shapes (Gon{\c{c}}alves et al, 2018).…

Computational Geometry · Computer Science 2021-06-03 Dibyayan Chakraborty , Kshitij Gajjar

The interval graph for a set of intervals on a line consists of one vertex for each interval, and an edge for each intersecting pair of intervals. A probe interval graph is a variant that is motivated by an application to genomics, where…

Data Structures and Algorithms · Computer Science 2013-07-23 Ross M. McConnell , Yahav Nussbaum

A recent paper of Balogh, Li and Treglown initiated the study of Dirac-type problems for ordered graphs. In this paper we prove a number of results in this area. In particular, we determine asymptotically the minimum degree threshold for…

Combinatorics · Mathematics 2022-10-18 Andrea Freschi , Andrew Treglown

This paper shows NP-completeness for finding Hamiltonian cycles in induced subgraphs of the dual graphs of semi-regular tessilations. It also shows NP-hardness for a new, wide class of graphs called augmented square grids. This work follows…

Computational Complexity · Computer Science 2019-10-01 Divya Gopinath , Rohan Kodialam , Kevin Lu , Jayson Lynch , Santiago Ospina

An (h,s,t)-representation of a graph G consists of a collection of subtrees of a tree T, where each subtree corresponds to a vertex of G such that (i) the maximum degree of T is at most h, (ii) every subtree has maximum degree at mots s,…

Combinatorics · Mathematics 2011-12-15 Liliana Alcón , Marisa Gutierrez , María Pía Mazzoleni

We present a new model for hybrid planarity that relaxes existing hybrid representations. A graph $G = (V,E)$ is $(k,p)$-planar if $V$ can be partitioned into clusters of size at most $k$ such that $G$ admits a drawing where: (i) each…

Data Structures and Algorithms · Computer Science 2018-09-25 Emilio Di Giacomo , William J. Lenhart , Giuseppe Liotta , Timothy W. Randolph , Alessandra Tappini

In the Partially Embedded Planarity problem, we are given a graph $G$ together with a topological drawing of a subgraph $H$ of $G$. The task is to decide whether the drawing can be extended to a drawing of the whole graph such that no two…

Computational Geometry · Computer Science 2024-10-18 Simon D. Fink , Ignaz Rutter , Sandhya T. P

Traditional representations of graphs and their duals suggest the requirement that the dual vertices be placed inside their corresponding primal faces, and the edges of the dual graph cross only their corresponding primal edges. We consider…

Computational Geometry · Computer Science 2007-05-23 C. Erten , S. G. Kobourov

A simple topological graph T = (V(T), E(T)) is a drawing of a graph in the plane where every two edges have at most one common point (an endpoint or a crossing) and no three edges pass through a single crossing. Topological graphs G and H…

Combinatorics · Mathematics 2022-12-13 Jan Kynčl

We consider the problem of partitioning a graph into a non-fixed number of non-overlapping subgraphs of maximum density. The density of a partition is the sum of the densities of the subgraphs, where the density of a subgraph is its average…

Computational Complexity · Computer Science 2022-02-17 Cristina Bazgan , Katrin Casel , Pierre Cazals

Finding dense subgraphs of a large graph is a standard problem in graph mining that has been studied extensively both for its theoretical richness and its many practical applications. In this paper we introduce a new family of dense…

Data Structures and Algorithms · Computer Science 2021-06-07 Nate Veldt , Austin R. Benson , Jon Kleinberg

We present the first truly subcubic, combinatorial algorithm for detecting an induced $4$-cycle in a graph. The running time is $O(n^{2.84})$ on $n$-node graphs, thus separating the task of detecting induced $4$-cycles from detecting…

Data Structures and Algorithms · Computer Science 2026-01-12 Amir Abboud , Shyan Akmal , Nick Fischer

Graph G is the square of graph H if two vertices x, y have an edge in G if and only if x, y are of distance at most two in H. Given H it is easy to compute its square H2, however Motwani and Sudan proved that it is NP-complete to determine…

Discrete Mathematics · Computer Science 2009-02-13 Babak Farzad , Lap Chi Lau , Van Bang Le , Nguyen Ngoc Tuy

An \emph{s-graph} is a graph with two kinds of edges: \emph{subdivisible} edges and \emph{real} edges. A \emph{realisation} of an s-graph $B$ is any graph obtained by subdividing subdivisible edges of $B$ into paths of arbitrary length (at…

Discrete Mathematics · Computer Science 2013-09-05 Benjamin Lévêque , David Y. Lin , Frédéric Maffray , Nicolas Trotignon

Recent research has shown that alignment between the structure of graph data and the geometry of an embedding space is crucial for learning high-quality representations of the data. The uniform geometry of Euclidean and hyperbolic spaces…

Machine Learning · Computer Science 2023-06-27 Wei Zhao , Federico Lopez , J. Maxwell Riestenberg , Michael Strube , Diaaeldin Taha , Steve Trettel

We unify several seemingly different graph and digraph classes under one umbrella. These classes are all broadly speaking different generalizations of interval graphs, and include, in addition to interval graphs, also adjusted interval…

Discrete Mathematics · Computer Science 2018-06-28 Pavol Hell , Jing Huang , Ross M. McConnell , Arash Rafiey