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Detection and segmentation of the hippocampal structures in volumetric brain images is a challenging problem in the area of medical imaging. In this paper, we propose a two-stage 3D fully convolutional neural network that efficiently…

Computer Vision and Pattern Recognition · Computer Science 2019-02-13 Dengsheng Chen , Wenxi Liu , You Huang , Tong Tong , Yuanlong Yu

Current magnetic resonance imaging (MRI) requires the subject to remain stationary to limit motion artifacts and avoid unwanted field-induced brain stimulation. However, imaging during large-scale motion could enable studies in which motion…

The human brain undergoes dynamic, potentially pathology-driven, structural changes throughout a lifespan. Longitudinal Magnetic Resonance Imaging (MRI) and other neuroimaging data are valuable for characterizing trajectories of change…

Computer Vision and Pattern Recognition · Computer Science 2025-10-14 Agampreet Aulakh , Nils D. Forkert , Matthias Wilms

Purpose: The suppression of motion artefacts from MR images is a challenging task. The purpose of this paper is to develop a standalone novel technique to suppress motion artefacts from MR images using a data-driven deep learning approach.…

Image and Video Processing · Electrical Eng. & Systems 2020-10-08 Kamlesh Pawar , Zhaolin Chen , N. Jon Shah , Gary F. Egan

Magnetic Resonance Fingerprinting (MRF) and other highly accelerated transient-state parameter mapping techniques enable simultaneous quantification of multiple tissue properties, but often suffer from aliasing artifacts due to compressed…

Traditional image quality assessment metrics like Mean Squared Error and Structural Similarity Index often fail to reflect perceptual quality under complex distortions. We propose the Hybrid Image Resolution Quality Metric (HIRQM),…

Image and Video Processing · Electrical Eng. & Systems 2025-05-06 Vineesh Kumar Reddy Mondem

Cardiac Magnetic Resonance Imaging (MRI) plays an important role in the analysis of cardiac function. However, the acquisition is often accompanied by motion artefacts because of the difficulty of breath-hold, especially for acute symptoms…

Image and Video Processing · Electrical Eng. & Systems 2022-10-17 Ruizhe Li , Xin Chen

Electroencephalography (EEG) is a non-invasive method for measuring brain activity with high temporal resolution; however, EEG signals often exhibit low signal-to-noise ratios because of contamination from physiological and environmental…

Machine Learning · Computer Science 2025-09-03 Yuhong Zhang , Xusheng Zhu , Yuchen Xu , ChiaEn Lu , Hsinyu Shih , Gert Cauwenberghs , Tzyy-Ping Jung

Diffusion MRI tractography technique enables non-invasive visualization of the white matter pathways in the brain. It plays a crucial role in neuroscience and clinical fields by facilitating the study of brain connectivity and neurological…

Computer Vision and Pattern Recognition · Computer Science 2025-03-06 Yiqiong Yang , Yitian Yuan , Baoxing Ren , Ye Wu , Yanqiu Feng , Xinyuan Zhang

Mapping of human brain structural connectomes via diffusion MRI offers a unique opportunity to understand brain structural connectivity and relate it to various human traits, such as cognition. However, head displacement during image…

Neurons and Cognition · Quantitative Biology 2024-09-13 Yizi Zhang , Meimei Liu , Zhengwu Zhang , David Dunson

Purpose: T2* quantification from gradient echo magnetic resonance imaging is particularly affected by subject motion due to the high sensitivity to magnetic field inhomogeneities, which are influenced by motion and might cause signal loss.…

Image and Video Processing · Electrical Eng. & Systems 2025-09-11 Hannah Eichhorn , Veronika Spieker , Kerstin Hammernik , Elisa Saks , Lina Felsner , Kilian Weiss , Christine Preibisch , Julia A. Schnabel

Multimodal neuroimages, such as diffusion tensor imaging (DTI) and resting-state functional MRI (fMRI), offer complementary perspectives on brain activities by capturing structural or functional interactions among brain regions. While…

Machine Learning · Computer Science 2025-07-08 Meimei Yang , Yongheng Sun , Qianqian Wang , Andrea Bozoki , Maureen Kohi , Mingxia Liu

Inertial sensors can track object kinematics, however, unbounded drift from integrating noisy signals makes them impractical for MRI motion correction at millimeter resolution and minute-long scans. We introduce MR-Compass, which exploits…

Image and Video Processing · Electrical Eng. & Systems 2026-03-03 Musa Tunc Arslan , Fatih Calakli , Joshua Auger , Hongli Fan , Alan J Macy , Simon K Warfield

Precise segmentation of brain structures in magnetic resonance imaging (MRI) is essential for reliable neuroimaging analysis, yet voxel-wise deep models often yield anatomically inconsistent results that diverge from expert-defined…

Computer Vision and Pattern Recognition · Computer Science 2026-05-15 Ahmed Rekik , R. Jarrett Rushmore , Sylvain Bouix , Linda Marrakchi-Kacem

Brain extraction is a critical preprocessing step in the analysis of MRI neuroimaging studies and influences the accuracy of downstream analyses. The majority of brain extraction algorithms are, however, optimized for processing healthy…

Magnetic resonance imaging (MRI) is one of the noninvasive imaging modalities that can produce high-quality images. However, the scan procedure is relatively slow, which causes patient discomfort and motion artifacts in images. Accelerating…

Image and Video Processing · Electrical Eng. & Systems 2023-01-18 Samira Vafay Eslahi , Jian Tao , Jim Ji

Quality assessment of diffusion MRI (dMRI) data is essential prior to any analysis, so that appropriate pre-processing can be used to improve data quality and ensure that the presence of MRI artifacts do not affect the results of subsequent…

Image and Video Processing · Electrical Eng. & Systems 2019-11-19 Zahra Riahi Samani , Jacob Antony Alappatt , Drew Parker , Abdol Aziz Ould Ismail , Ragini Verma

Multimodal 3D MRI brain tumor segmentation is a pivotal step in radiotherapy target delineation, surgical planning and post-treatment assessment. Existing methods often assume artifact-free MRI images. However, inevitable patient motion…

Image and Video Processing · Electrical Eng. & Systems 2026-05-18 Yuchun Wang , Xiaosong Li , Gefei Liang , Yang Liu

Articulated object manipulation remains a critical challenge in robotics due to the complex kinematic constraints and the limited physical reasoning of existing methods. In this work, we introduce ArtGS, a novel framework that extends 3D…

Robotics · Computer Science 2025-07-04 Qiaojun Yu , Xibin Yuan , Yu jiang , Junting Chen , Dongzhe Zheng , Ce Hao , Yang You , Yixing Chen , Yao Mu , Liu Liu , Cewu Lu

Currently, connectomes (e.g., functional or structural brain graphs) can be estimated in humans at $\approx 1~mm^3$ scale using a combination of diffusion weighted magnetic resonance imaging, functional magnetic resonance imaging and…