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Graph transformations definable in logic can be described using the notion of transductions. By understanding transductions as a basic embedding mechanism, which captures the possibility of encoding one graph in another graph by means of…

Combinatorics · Mathematics 2025-01-09 Michał Pilipczuk

The conventional definition of hypergraph has two major issues: (1) there is not a standard definition of directed hypergraph and (2) there is not a formal definition of nested hypergraph. To resolve these issues, we propose a new…

Machine Learning · Computer Science 2024-10-22 Daniel T. Chang

Many networked systems are governed by non-pairwise interactions between nodes. The resulting higher-order interaction structure can then be encoded by means of a hypernetwork. In this paper we consider dynamical systems on hypernetworks by…

Dynamical Systems · Mathematics 2023-08-11 Sören von der Gracht , Eddie Nijholt , Bob Rink

Heterogeneous graphs are present in various domains, such as social networks, recommendation systems, and biological networks. Unlike homogeneous graphs, heterogeneous graphs consist of multiple types of nodes and edges, each representing…

Social and Information Networks · Computer Science 2024-10-17 Hritaban Ghosh , Chen Changyu , Arunesh Sinha , Shamik Sural

Biomedical networks (or graphs) are universal descriptors for systems of interacting elements, from molecular interactions and disease co-morbidity to healthcare systems and scientific knowledge. Advances in artificial intelligence,…

Machine Learning · Computer Science 2025-02-07 Michelle M. Li , Kexin Huang , Marinka Zitnik

Network theory has proven to be a powerful tool in describing and analyzing systems by modelling the relations between their constituent objects. In recent years great progress has been made by augmenting `traditional' network theory.…

Data Analysis, Statistics and Probability · Physics 2016-06-03 Dominik Traxl , Niklas Boers , Jürgen Kurths

Graph clustering, which aims to divide nodes in the graph into several distinct clusters, is a fundamental yet challenging task. Benefiting from the powerful representation capability of deep learning, deep graph clustering methods have…

Machine Learning · Computer Science 2023-09-13 Yue Liu , Jun Xia , Sihang Zhou , Xihong Yang , Ke Liang , Chenchen Fan , Yan Zhuang , Stan Z. Li , Xinwang Liu , Kunlun He

Graphs are widespread data structures used to model a wide variety of problems. The sheer amount of data to be processed has prompted the creation of a myriad of systems that help us cope with massive scale graphs. The pressure to deliver…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-10-09 Luis M. Vaquero , Felix Cuadrado , Matei Ripeanu

Graph embeddings have become a key and widely used technique within the field of graph mining, proving to be successful across a broad range of domains including social, citation, transportation and biological. Graph embedding techniques…

Machine Learning · Computer Science 2018-06-21 Stephen Bonner , Ibad Kureshi , John Brennan , Georgios Theodoropoulos , Andrew Stephen McGough , Boguslaw Obara

Graphs are widely used to encapsulate a variety of data formats, but real-world networks often involve complex node relations beyond only being pairwise. While hypergraphs and hierarchical graphs have been developed and employed to account…

Machine Learning · Computer Science 2024-02-21 Zehui Li , Xiangyu Zhao , Mingzhu Shen , Guy-Bart Stan , Pietro Liò , Yiren Zhao

Real-world complex systems are often better modeled as hypergraphs, where edges represent group interactions involving multiple entities. Understanding and quantifying homophily (similarity-driven association) in such networks is essential…

Social and Information Networks · Computer Science 2025-11-25 Gaurav Kumar , Akrati Saxena , Chandrakala Meena

Graph-based collaborative filtering is capable of capturing the essential and abundant collaborative signals from the high-order interactions, and thus received increasingly research interests. Conventionally, the embeddings of users and…

Information Retrieval · Computer Science 2022-08-03 Yiding Zhang , Chaozhuo Li , Senzhang Wang , Jianxun Lian , Xing Xie

This paper introduces graphemes for constructing and analyzing stochastic processes that describe the evolution of large dynamic graphs. Unlike graphons, which capture the static properties of dense graphs via exchangeability or subgraph…

Probability · Mathematics 2025-04-16 Andreas Greven , Frank den Hollander , Anton Klimovsky , Anita Winter

Recently, the deep learning community has given growing attention to neural architectures engineered to learn problems in relational domains. Convolutional Neural Networks employ parameter sharing over the image domain, tying the weights of…

Machine Learning · Computer Science 2019-02-26 Marcelo O. R. Prates , Pedro H. C. Avelar , Henrique Lemos , Marco Gori , Luis Lamb

In recommender systems, user-item interactions can be modeled as a bipartite graph, where user and item nodes are connected by undirected edges. This graph-based view has motivated the rapid adoption of graph neural networks (GNNs), which…

Graphs are a basic tool for the representation of modern data. The richness of the topological information contained in a graph goes far beyond its mere interpretation as a one-dimensional simplicial complex. We show how topological…

Combinatorics · Mathematics 2018-10-11 Mattia G. Bergomi , Massimo Ferri , Lorenzo Zuffi

Disease spreading models such as the ubiquitous SIS compartmental model and its numerous variants are widely used to understand and predict the behaviour of a given epidemic or information diffusion process. A common approach to imbue more…

Dynamical Systems · Mathematics 2025-11-18 Eugene Tan , Michael Small , Shannon D. Algar

Matrix-based centrality measures have enjoyed significant popularity in network analysis, in no small part due to our ability to rigorously analyze their behavior as parameters vary. Recent work has considered the relationship between…

Social and Information Networks · Computer Science 2019-02-06 Eric Horton , Kyle Kloster , Blair D. Sullivan

Federated graph learning collaboratively learns a global graph neural network with distributed graphs, where the non-independent and identically distributed property is one of the major challenges. Most relative arts focus on traditional…

Machine Learning · Computer Science 2024-07-02 Wenke Huang , Guancheng Wan , Mang Ye , Bo Du

In order to make more complex number-based strings from topological coding for defending against the intelligent attacks equipped with quantum computing and providing effective protection technology for the age of quantum computing, we will…

Cryptography and Security · Computer Science 2024-04-18 Bing Yao , Fei Ma