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Complex multidimensional stochastic dynamics can be approximately described as diffusion along reaction coordinates (RCs). If the RCs are optimally selected, the diffusive model allows one to compute important properties of the dynamics…

Chemical Physics · Physics 2023-04-12 Sergei V. Krivov

In this paper, the impulse response for a 3-D microfluidic channel in the presence of Poiseuille flow is obtained by solving the diffusion equation in radial coordinates. Using the radial distribution, the axial distribution is then…

Emerging Technologies · Computer Science 2019-12-11 Fatih Dinc , Bayram Cevdet Akdeniz , Ali Emre Pusane , Tuna Tugcu

In diffusion-controlled drug delivery, it is possible for drug molecules to bind to the carrier material and never be released. A common way to incorporate this phenomenon into the governing mechanistic model is to include an irreversible…

Medical Physics · Physics 2024-01-19 Elliot J. Carr

Recently, the problem of boundary stabilization for unstable linear constant-coefficient reaction-diffusion equation on N-balls has been solved by means of the backstepping method. However, the extension of this result to spatially-varying…

Optimization and Control · Mathematics 2016-01-11 Rafael Vazquez , Miroslav Krstic

We analyze the effect of nonlinear boundary conditions on an advection-diffusion equation on the half-line. Our model is inspired by models for crystal growth where diffusion models diffusive relaxation of a displacement field, advection is…

Analysis of PDEs · Mathematics 2019-09-06 Antoine Pauthier , Arnd Scheel

A graph reaction--diffusion (RD) equation is a system of differential equations that is defined on the nodes of a graph. Consider a sequence of growing graphs that converges in cut norm to a limiting graphon. We show that the solutions of…

Dynamical Systems · Mathematics 2026-04-24 Edith J. Zhang , James Scott , Qiang Du

Uncertainty quantification and sensitivity analyses are a vital component for predictive modeling in the sciences and engineering. The adjoint approach to sensitivity analysis requires solving a primary system of equations and a…

Computational Physics · Physics 2016-12-08 Kelli D. Humbird , Ryan G. McClarren

The transport of an infinitely thin, hard rod in a random, dense array of point obstacles is investigated by molecular dynamics simulations. Our model mimics the sterically hindered dynamics in dense needle liquids. The center-of-mass…

Statistical Mechanics · Physics 2008-09-22 Felix Höfling , Erwin Frey , Thomas Franosch

We study reaction-diffusion equations of various types in the half-space. For bistable reactions with Dirichlet boundary conditions, we prove conditional uniqueness: there is a unique nonzero bounded steady state which exceeds the bistable…

Analysis of PDEs · Mathematics 2020-07-29 Henri Berestycki , Cole Graham

The boundary layer flow in a Rayleigh-B\'enard convection cell of rectangular shape has been visualized in this fluid dynamics video. The experiment has been undertaken in air at a Rayleigh number $Ra=1.3\times 10^{10}$ and a Prandtl number…

Fluid Dynamics · Physics 2012-09-28 Ronald du Puits , Johannes Rilk , Christian Resagk , André Thess

This paper is devoted to the study of travelling fronts of reaction-diffusion equations with periodic advection in the whole plane $\mathbb R^2$. We are interested in curved fronts satisfying some "conical" conditions at infinity. We prove…

Analysis of PDEs · Mathematics 2014-05-21 Mohammad El Smaily , Francois Hamel , Rui Huang

In this work, the rate law for inhomogeneous concentration distributions has been formulated, by applying spatial integration over the products of species concentrations. Reaction rates for typical reactions have been investigated by…

Chemical Physics · Physics 2025-12-24 Xiang-Yuan Li , Xin-Yu Zhang , ChuanFeng Yue

Asymptotic radiative transfer (ART), like diffusion theory, assumes the angular intensity distribution incident at a boundary is identical with that in the depth of the scattering medium. However, the asymptotic intensity profile and…

Optics · Physics 2019-05-06 Adrian Selden

We consider a diffusion model with limit cycle reaction functions, in the presence of convection. We select a set of functions derived from a realistic reaction model: the Schnakenberg equations. This resultant form is unsymmetrical. We…

Analysis of PDEs · Mathematics 2009-11-13 E. H. Flach , S. Schnell , J. Norbury

This is the first part of our study of inertial manifolds for the system of 1D reaction-diffusion-advection equations which is devoted to the case of Dirichlet or Neumann boundary conditions. Although this problem does not initially possess…

Analysis of PDEs · Mathematics 2017-03-02 Anna Kostianko , Sergey Zelik

One-dimensional non-equilibrium models of particles subjected to a coagulation-diffusion process are important in understanding non-equilibrium dynamics, and fluctuation-dissipation relation. We consider in this paper transport properties…

Statistical Mechanics · Physics 2015-06-18 Jean-Yves Fortin

Problems involving the capture of a moving entity by a trap occur in a variety of physical situations, the moving entity being an electron, an excitation, an atom, a molecule, a biological object such as a receptor cluster, a cell, or even…

Statistical Mechanics · Physics 2015-06-17 K. Spendier , S. Sugaya , V. M. Kenkre

The reaction-diffusion master equation (RDME) is a lattice-based stochastic model for spatially resolved cellular processes. It is often interpreted as an approximation to spatially continuous reaction-diffusion models, which, in the limit…

Statistical Mechanics · Physics 2022-01-11 Alberto Montefusco , Christof Schütte , Stefanie Winkelmann

We study reaction dynamics on a model potential energy surface exhibiting post-transition state bifurcation in the vicinity of a valley ridge inflection point. We compute fractional yields of products reached after the VRI region is…

Chemical Physics · Physics 2015-06-17 Peter Collins , Barry K. Carpenter , Gregory S. Ezra , Stephen Wiggins

We investigate a nonlinear parabolic partial differential equation whose boundary conditions contain a single control input. This model describes a chemical reaction of the type ``$A \to $ product'', occurring in a dispersed flow tubular…

Analysis of PDEs · Mathematics 2025-11-07 Yevgeniia Yevgenieva , Alexander Zuyev , Peter Benner