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We study contact representations of graphs in which vertices are represented by axis-aligned polyhedra in 3D and edges are realized by non-zero area common boundaries between corresponding polyhedra. We show that for every 3-connected…
Pairwise compatibility graphs (PCGs) with non-negative integer edge weights recently have been used to describe rare evolutionary events and scenarios with horizontal gene transfer. Here we consider the case that vertices are separated by…
In this paper, we propose a new type of graph, denoted as "embedded-graph", and its theory, which employs a distributed representation to describe the relations on the graph edges. Embedded-graphs can express linguistic and complicated…
A hole is an induced cycle of length at least 4. Let $\l\ge 2$ be a positive integer, let ${\cal G}_l$ denote the family of graphs which have girth $2\l+1$ and have no holes of odd length at least $2\l+3$, and let $G\in {\cal G}_{\l}$. For…
An embedding of a graph in $3$-space is linkless if for every two disjoint cycles there exists an embedded ball that contains one of the cycles and is disjoint from the other. We prove that every bipartite linklessly embeddable (simple)…
A linear graph is a graph whose vertices are totally ordered. Biological and linguistic sequences with interactions among symbols are naturally represented as linear graphs. Examples include protein contact maps, RNA secondary structures…
For any graph $G$, let $t(G)$ be the number of spanning trees of $G$, $L(G)$ be the line graph of $G$ and for any non-negative integer $r$, $S_r(G)$ be the graph obtained from $G$ by replacing each edge $e$ by a path of length $r+1$…
The main result of this article is the decomposition of tensor products of representations of SL(2) in the sum of irreducible representations parametrized by outerplanar graphs. An outerplanar graph is a graph with the vertices 0, 1, 2,…
A mixed graph $G$ is a graph obtained from a simple undirected graph by orientating a subset of edges. $G$ is self-converse if it is isomorphic to the graph obtained from $G$ by reversing each directed edge. For two mixed graphs $G$ and $H$…
A mixed extension of a graph $G$ is a graph $H$ obtained from $G$ by replacing each vertex of $G$ by a clique or a coclique, where vertices of $H$ coming from different vertices of $G$ are adjacent if and only if the original vertices are…
We consider drawings of graphs that contain dense subgraphs. We introduce intersection-link representations for such graphs, in which each vertex $u$ is represented by a geometric object $R(u)$ and in which each edge $(u,v)$ is represented…
We prove that the linearly edge reinforced random walk (LRRW) on any graph with bounded degrees is recurrent for sufficiently small initial weights. In contrast, we show that for non-amenable graphs the LRRW is transient for sufficiently…
An IC-plane graph is a topological graph where every edge is crossed at most once and no two crossed edges share a vertex. We show that every IC-plane graph has a visibility drawing where every vertex is an L-shape, and every edge is either…
An ortho-polygon visibility representation of an $n$-vertex embedded graph $G$ (OPVR of $G$) is an embedding-preserving drawing of $G$ that maps every vertex to a distinct orthogonal polygon and each edge to a vertical or horizontal…
A cycle basis in an undirected graph is a minimal set of simple cycles whose symmetric differences include all Eulerian subgraphs of the given graph. We define a rooted cycle basis to be a cycle basis in which all cycles contain a specified…
A bipartite graph $G=(L,R;E)$ with at least one edge is said to be identifiable if for every vertex $v\in L$, the subgraph induced by its non-neighbors has a matching of cardinality $|L|-1$. An $\ell$-subgraph of $G$ is an induced subgraph…
In an upward-planar L-drawing of a directed acyclic graph (DAG) each edge $e$ is represented as a polyline composed of a vertical segment with its lowest endpoint at the tail of $e$ and of a horizontal segment ending at the head of $e$.…
The betweenness structure of a finite metric space $M = (X, d)$ is a pair $\mathcal{B}(M) = (X,\beta_M)$ where $\beta_M$ is the so-called betweenness relation of $M$ that consists of point triplets $(x, y, z)$ such that $d(x, z) = d(x, y) +…
Simultaneous Geometric Embedding (SGE) asks whether, for a given collection of graphs on the same vertex set V, there is an embedding of V in the plane that admits a crossing-free drawing with straightline edges for each of the given…
A visibility representation is a classical drawing style of planar graphs. It displays the vertices of a graph as horizontal vertex-segments, and each edge is represented by a vertical edge-segment touching the segments of its end vertices;…