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MicroRNAs (miRNAs) are non-coding RNAs with approximately 22 nucleotides (nt) that are derived from precursor molecules. These precursor molecules or pre-miRNAs often fold into stem-loop hairpin structures. However, a large number of…

Genomics · Quantitative Biology 2016-10-10 Ling Zhong , Jason T. L. Wang

In this report a systematic approach is used to determine the approximate genetic network and robust dependencies underlying differentiation. The data considered is in the form of a binary matrix and represent the expression of the nine…

Molecular Networks · Quantitative Biology 2007-05-23 Radhakrishnan Nagarajan , Jane E. Aubin , Charlotte A. Peterson

We extend the spectral range of our stellar population synthesis models based on the MILES and CaT empirical stellar spectral libraries. For this purpose we combine these two libraries with the Indo-U.S. to construct composite stellar…

Cosmology and Nongalactic Astrophysics · Physics 2015-06-05 A. Vazdekis , E. Ricciardelli , A. J. Cenarro , J. G. Rivero-González , L. A. Díaz-García , J. Falcón-Barroso

Protecting and restoring forest ecosystems is critical for biodiversity conservation and carbon sequestration. Forest monitoring on a global scale is essential for prioritizing and assessing conservation efforts. Satellite-based remote…

Computer Vision and Pattern Recognition · Computer Science 2024-06-28 Luis Miguel Pazos-Outón , Cristina Nader Vasconcelos , Anton Raichuk , Anurag Arnab , Dan Morris , Maxim Neumann

This article presents GrowliFlower, a georeferenced, image-based UAV time series dataset of two monitored cauliflower fields of size 0.39 and 0.60 ha acquired in 2020 and 2021. The dataset contains RGB and multispectral orthophotos from…

Computer Vision and Pattern Recognition · Computer Science 2023-05-25 Jana Kierdorf , Laura Verena Junker-Frohn , Mike Delaney , Mariele Donoso Olave , Andreas Burkart , Hannah Jaenicke , Onno Muller , Uwe Rascher , Ribana Roscher

Aims. We intend to compile a new galaxy group and cluster sample of the latest available SDSS data, adding several parameter for the purpose of studying the supercluster network, galaxy and group evolution, and their connection to the…

Cosmology and Nongalactic Astrophysics · Physics 2012-02-29 E. Tempel , E. Tago , L. J. Liivamägi

Accessions are prospective sources of genetic variability, as well as valuable genetic resources to deal with present and future crop breeding difficulties. The assessment of population structure and genetic diversity of tomatoes (Solanum…

Quantitative Methods · Quantitative Biology 2024-03-27 Kamaran Salh Rasul , Nawroz Abdul-razzak Tahir

Trisomy 21 results in Down syndrome, a multifaceted genetic disorder with diverse clinical phenotypes, including heart defects, immune dysfunction, neurodevelopmental differences, and early-onset dementia risk. Heterogeneity and fragmented…

This document gives a brief description of Korean data prepared for the SPMRL 2013 shared task. A total of 27,363 sentences with 350,090 tokens are used for the shared task. All constituent trees are collected from the KAIST Treebank and…

Computation and Language · Computer Science 2013-09-11 Jinho D. Choi

The availability of genomic data is essential to progress in biomedical research, personalized medicine, etc. However, its extreme sensitivity makes it problematic, if not outright impossible, to publish or share it. As a result, several…

Genomics · Quantitative Biology 2022-01-19 Bristena Oprisanu , Georgi Ganev , Emiliano De Cristofaro

We enumerate the number of RNA contact structures according to their genus, i.e. the topological character of their pseudoknots. By using a recently proposed matrix model formulation for the RNA folding problem, we obtain exact results for…

Biomolecules · Quantitative Biology 2009-11-10 G. Vernizzi , H. Orland , A. Zee

We present Samanantar, the largest publicly available parallel corpora collection for Indic languages. The collection contains a total of 49.7 million sentence pairs between English and 11 Indic languages (from two language families).…

Phylogenetic networks are used to represent the evolutionary history of species. Recently, the new class of orchard networks was introduced, which were later shown to be interpretable as trees with additional horizontal arcs. This makes the…

Combinatorics · Mathematics 2023-05-09 Leo van Iersel , Mark Jones , Esther Julien , Yukihiro Murakami

Botanical specimens are shared as long-term consultable research objects in a global network of specimen repositories. Multiple specimens are generated from a shared field collection event; generated specimens are then managed individually…

Digital Libraries · Computer Science 2019-01-04 Nicky Nicolson , Alan Paton , Sarah Phillips , Allan Tucker

Context. The populations of small bodies of the Solar System (asteroids, comets, Kuiper-Belt objects) are used to constrain the origin and evolution of the Solar System. Both their orbital distribution and composition distribution are…

Earth and Planetary Astrophysics · Physics 2021-08-13 A. V. Sergeyev , B. Carry

Accurate classification of clinical text often requires fine-tuning pre-trained language models, a process that is costly and time-consuming due to the need for high-quality data and expert annotators. Synthetic data generation offers an…

Computation and Language · Computer Science 2025-01-28 Ivan Lopez , Fateme Nateghi Haredasht , Kaitlin Caoili , Jonathan H Chen , Akshay Chaudhari

Symbiotic stars (SySts) are interacting binaries composed of a red giant transferring material to a hot compact star, typically a white dwarf. Although only about 300 systems are confirmed, the Galactic population is estimated at 1.2 x 10^3…

Personalizing drug prescriptions in cancer care based on genomic information requires associating genomic markers with treatment effects. This is an unsolved challenge requiring genomic patient data in yet unavailable volumes as well as…

The traditional paradigm of applying deep learning -- collect, annotate and train on data -- is not applicable to image-based plant phenotyping as almost 400,000 different plant species exists. Data costs include growing physical samples,…

Computer Vision and Pattern Recognition · Computer Science 2020-04-27 Daniel Ward , Peyman Moghadam

Deep learning techniques have been successfully deployed for automating plant stress identification and quantification. In recent years, there is a growing push towards training models that are interpretable -i.e. that justify their…

Computer Vision and Pattern Recognition · Computer Science 2020-07-14 Koushik Nagasubramanian , Asheesh K. Singh , Arti Singh , Soumik Sarkar , Baskar Ganapathysubramanian