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Related papers: NEP-CG and NEP-AACG: Efficient coarse-grained and …

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Soft condensed matter structures often challenge us with complex many-body phenomena governed by collective modes spanning wide spatial and temporal domains. In order to successfully tackle such problems mesoscopic coarse-grained (CG)…

Soft Condensed Matter · Physics 2023-07-12 Vlad P Sokhan , Michael A Seaton , Ilian T Todorov

Generative recommendation (GR) has emerged as a promising paradigm that replaces fragmented, scenario-specific architectures with unified Transformer-based models, exhibiting scaling-law behavior where recommendation quality improves…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-14 Huichao Chai , Zhixin Wu , Xuemiao Li , Shiqing Fan , Hengfeng Wang , Maojun Peng , Lu Xu , Yaoyuan Wang , Yibo Jin , Wei Guo , Yongxiang Feng

For training fully-connected neural networks (FCNNs), we propose a practical approximate second-order method including: 1) an approximation of the Hessian matrix and 2) a conjugate gradient (CG) based method. Our proposed approximate…

Machine Learning · Computer Science 2018-12-07 Sheng-Wei Chen , Chun-Nan Chou , Edward Y. Chang

Bottom-up coarse-grained (CG) modeling expands the spatial and temporal scales of molecular simulation by seeking a reduced, thermodynamically consistent representation of an atomistic model. Developments in CG theory have largely focused…

Chemical Physics · Physics 2025-03-28 Patrick G. Sahrmann , Gregory A. Voth

Dedicated analog neurocomputing circuits are promising for high-throughput, low power consumption applications of machine learning (ML) and for applications where implementing a digital computer is unwieldy (remote locations; small, mobile,…

Neural and Evolutionary Computing · Computer Science 2025-11-18 Ye min Thant , Methawee Nukunudompanich , Chu-Chen Chueh , Manabu Ihara , Sergei Manzhos

Convolutional Neural Networks (CNNs) have shown impressive performance in computer vision tasks such as image classification, detection, and segmentation. Moreover, recent work in Generative Adversarial Networks (GANs) has highlighted the…

Machine Learning · Computer Science 2021-01-06 Samarth Sinha , Animesh Garg , Hugo Larochelle

We propose a data-driven framework for identifying coarse-grained (CG) Lennard-Jones (LJ) potential parameters in confined systems for simple liquids. Our approach involves the use of a Deep Neural Network (DNN) that is trained to…

Statistical Mechanics · Physics 2023-11-06 Ishan Nadkarni , Haiyi Wu , Narayana. R. Aluru

While end-to-end neural machine translation (NMT) has achieved impressive progress, noisy input usually leads models to become fragile and unstable. Generating adversarial examples as the augmented data has been proved to be useful to…

Computation and Language · Computer Science 2022-10-25 Juncheng Wan , Jian Yang , Shuming Ma , Dongdong Zhang , Weinan Zhang , Yong Yu , Zhoujun Li

Model selection in Gaussian processes scales prohibitively with the size of the training dataset, both in time and memory. While many approximations exist, all incur inevitable approximation error. Recent work accounts for this error in the…

Machine Learning · Computer Science 2025-07-08 Jonathan Wenger , Kaiwen Wu , Philipp Hennig , Jacob R. Gardner , Geoff Pleiss , John P. Cunningham

We propose a generalized Langevin dynamics (GLD) technique to construct non-Markovian particle-based coarse-grained models from fine-grained reference simulations and to efficiently integrate them. The proposed GLD model has the form of a…

Soft Condensed Matter · Physics 2018-11-16 Gerhard Jung , Martin Hanke , Friederike Schmid

The majority of research in both training Artificial Neural Networks (ANNs) and modeling learning in biological brains focuses on synaptic plasticity, where learning equates to changing the strength of existing connections. However, in…

Neural and Evolutionary Computing · Computer Science 2026-03-13 James C. Knight , Johanna Senk , Thomas Nowotny

By imitating the synaptic connectivity and plasticity of the brain, emerging electronic nanodevices offer new opportunities as the building blocks of neuromorphic systems. One challenge for largescale simulations of computational…

Neural and Evolutionary Computing · Computer Science 2022-05-11 T. Hennen , A. Elias , J. F. Nodin , G. Molas , R. Waser , D. J. Wouters , D. Bedau

Training networks consisting of biophysically accurate neuron models could allow for new insights into how brain circuits can organize and solve tasks. We begin by analyzing the extent to which the central algorithm for neural network…

Neurons and Cognition · Quantitative Biology 2023-11-22 James Hazelden , Yuhan Helena Liu , Eli Shlizerman , Eric Shea-Brown

Porous media is widely distributed in nature, found in environments such as soil, rock formations, and plant tissues, and is crucial in applications like subsurface oil and gas extraction, medical drug delivery, and filtration systems.…

Geophysics · Physics 2025-01-03 Qingqi Zhao , Xiaoxue Han , Ruichang Guo , Cheng Chen

We assess Gaussian process (GP) regression as a technique to model interatomic forces in metal nanoclusters by analysing the performance of 2-body, 3-body and many-body kernel functions on a set of 19-atom Ni cluster structures. We find…

Computational Physics · Physics 2018-07-11 Claudio Zeni , Kevin Rossi , Aldo Glielmo , Ádám Fekete , Nicola Gaston , Francesca Baletto , Alessandro De Vita

Using a neural network potential (ANI-1ccx) generated from quantum data on a large data set of molecules and pairs of molecules, isothermal, constant volume simulations demonstrate that the model can be as accurate as ab initio molecular…

Chemical Physics · Physics 2021-01-11 Alexander S. Lyons, , Steven W. Rick

Objective: A novel structure based on channel-wise attention mechanism is presented in this paper. Embedding with the proposed structure, an efficient classification model that accepts multi-lead electrocardiogram (ECG) as input is…

Signal Processing · Electrical Eng. & Systems 2020-03-27 Hao Tung , Chao Zheng , Xinsheng Mao , Dahong Qian

The ability to train large-scale neural networks has resulted in state-of-the-art performance in many areas of computer vision. These results have largely come from computational break throughs of two forms: model parallelism, e.g. GPU…

Computer Vision and Pattern Recognition · Computer Science 2013-12-24 Thomas Paine , Hailin Jin , Jianchao Yang , Zhe Lin , Thomas Huang

While molecular dynamics (MD) is a very useful computational method for atomistic simulations, modeling the interatomic interactions for reliable MD simulations of real materials has been a long-standing challenge. In 2007, Behler and…

Materials Science · Physics 2025-06-11 Ling Tang , Weiyi Xia , Gayatri Viswanathan , Ernesto Soto , Kirill Kovnir , Cai-Zhuang Wang

Recent advances in equivariant graph neural networks (GNNs) have made deep learning amenable to developing fast surrogate models to expensive ab initio quantum mechanics (QM) approaches for molecular potential predictions. However, building…

Machine Learning · Computer Science 2023-07-07 Yuyang Wang , Changwen Xu , Zijie Li , Amir Barati Farimani