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The biomedical literature contains a vast collection of omics studies, yet most published data remain functionally inaccessible for computational reuse. When raw data are deposited in public repositories, essential information for…

Genomics · Quantitative Biology 2026-03-16 Alexandre Hutton , Jesse G. Meyer

The current landscape of AI for Science (AI4S) is predominantly anchored in large-scale textual corpora, where generative AI systems excel at hypothesis generation, literature search, and multi-modal reasoning. However, a critical…

Agentic memory systems have become critical for enabling LLM agents to maintain long-term context and retrieve relevant information efficiently. However, existing memory frameworks suffer from a fundamental limitation: they perform…

Computation and Language · Computer Science 2026-01-14 Anxin Tian , Yiming Li , Xing Li , Hui-Ling Zhen , Lei Chen , Xianzhi Yu , Zhenhua Dong , Mingxuan Yuan

Existing unstructured data analytics systems rely on experts to write code and manage complex analysis workflows, making them both expensive and time-consuming. To address these challenges, we introduce AgenticData, an innovative agentic…

Databases · Computer Science 2025-08-08 Ji Sun , Guoliang Li , Peiyao Zhou , Yihui Ma , Jingzhe Xu , Yuan Li

This paper introduces Agentics, a functional agentic AI framework for building LLM-based structured data workflow pipelines. Designed for both research and practical applications, Agentics offers a new data-centric paradigm in which agents…

Scientific progress in Earth science depends on integrating data across the planet's interconnected spheres. However, the accelerating volume and fragmentation of multi-sphere knowledge and data have surpassed human analytical capacity.…

There are different goals for literature research, from understanding an unfamiliar topic to generate hypothesis for the next research project. The nature of literature research also varies according to user's familiarity level of the…

Human-Computer Interaction · Computer Science 2026-03-25 Zefei Xie , Yuhan Guo , Kai Xu

The recent surge in AI agents that autonomously communicate, collaborate with humans and use diverse tools has unlocked promising opportunities in various real-world settings. However, a vital aspect remains underexplored: how agents handle…

Machine Learning · Computer Science 2025-11-04 Nabeel Seedat , Jiashuo Liu , Mihaela van der Schaar

Public research results on large-scale supervised finetuning of AI agents remain relatively rare, since the collection of agent training data presents unique challenges. In this work, we argue that the bottleneck is not a lack of underlying…

Large Language Models (LLMs) have advanced artificial intelligence by enabling human-like text generation and natural language understanding. However, their reliance on static training data limits their ability to respond to dynamic,…

Artificial Intelligence · Computer Science 2026-04-02 Aditi Singh , Abul Ehtesham , Saket Kumar , Tala Talaei Khoei , Athanasios V. Vasilakos

This article presents a modular, component-based architecture for developing and evaluating AI agents that bridge the gap between natural language interfaces and complex enterprise data warehouses. The system directly addresses core…

Artificial Intelligence · Computer Science 2025-09-30 Nooshin Bahador

As data continues to grow in scale and complexity, preparing, transforming, and analyzing it remains labor-intensive, repetitive, and difficult to scale. Since data contains knowledge and AI learns knowledge from it, the alignment between…

Artificial Intelligence · Computer Science 2025-10-07 Yanjie Fu , Dongjie Wang , Wangyang Ying , Xinyuan Wang , Xiangliang Zhang , Huan Liu , Jian Pei

Data-driven artificial intelligence (AI) approaches are fundamentally transforming the discovery of new materials. Despite the unprecedented availability of materials data in the scientific literature, much of this information remains…

Artificial Intelligence · Computer Science 2026-01-29 Di Zhang , Xue Jia , Tran Ba Hung , Seong Hoon Jang , Linda Zhang , Ryuhei Sato , Yusuke Hashimoto , Toyoto Sato , Kiyoe Konno , Shin-ichi Orimo , Hao Li

The rapid growth of scientific publications has made it increasingly difficult to keep literature reviews comprehensive and up-to-date. Though prior work has focused on automating retrieval and screening, the writing phase of systematic…

Computation and Language · Computer Science 2026-03-23 Gregory Hok Tjoan Go , Khang Ly , Anders Søgaard , Amin Tabatabaei , Maarten de Rijke , Xinyi Chen

The rise of large language models (LLMs) has sparked a surge of interest in agents, leading to the rapid growth of agent frameworks. Agent frameworks are software toolkits and libraries that provide standardized components, abstractions,…

Software Engineering · Computer Science 2025-12-02 Yanlin Wang , Xinyi Xu , Jiachi Chen , Tingting Bi , Wenchao Gu , Zibin Zheng

Agentic systems, in which diverse agents cooperate to tackle challenging problems, are exploding in popularity in the AI community. However, existing agentic frameworks take a relatively narrow view of agents, apply a centralized model, and…

Multiagent Systems · Computer Science 2026-01-30 Alok Kamatar , J. Gregory Pauloski , Yadu Babuji , Ryan Chard , Mansi Sakarvadia , Daniel Babnigg , Kyle Chard , Ian Foster

Semantic communications (SemCom), as one of the key technologies for 6G, is shifting networks from bit transmission to semantic information exchange. On this basis, introducing agentic artificial intelligence (AI) with perception, memory,…

Systems and Control · Electrical Eng. & Systems 2025-12-30 Haixiao Gao , Mengying Sun , Ruichen Zhang , Yanhan Wang , Xiaodong Xu , Nan Ma , Dusit Niyato , Ping Zhang

High-quality scientific review and perspective papers require substantial time and effort, limiting researchers' ability to synthesize emerging knowledge. While Large Language Models (LLMs) leverage AI Scientists for scientific workflows,…

Artificial Intelligence · Computer Science 2026-03-03 Sasi Kiran Gaddipati , Farhana Keya , Gollam Rabby , Sören Auer

Recently, Large Language Models (LLMs) have been applied to scientific equation discovery, leveraging their embedded scientific knowledge for hypothesis generation. However, current methods typically confine LLMs to the role of an equation…

Artificial Intelligence · Computer Science 2026-02-18 Shijie Xia , Yuhan Sun , Pengfei Liu

Agentic AI systems introduce a security surface that is qualitatively different from that of stateless LLMs. They persist memory, invoke external tools, coordinate with peer agents, and operate across sessions, allowing attacks to emerge…

Cryptography and Security · Computer Science 2026-05-07 Kexin Chu