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THIS IS A CORRECTED VERSION INCLUDING AN APPENDED CORRIGENDUM. Best match graphs arise naturally as the first processing intermediate in algorithms for orthology detection. Let $T$ be a phylogenetic (gene) tree $T$ and $\sigma$ an…
A hypergraph ${\cal F}$ is a set family defined on vertex set $V$. The dual of ${\cal F}$ is the set of minimal subsets $H$ of $V$ such that $F\cap H \ne \emptyset$ for any $F\in {\cal F}$. The computation of the dual is equivalent to many…
We consider straight line drawings of a planar graph $G$ with possible edge crossings. The \emph{untangling problem} is to eliminate all edge crossings by moving as few vertices as possible to new positions. Let $fix(G)$ denote the maximum…
When W is a finite Coxeter group of classical type (A, B, or D), noncrossing partitions associated to W and compatibility of almost positive roots in the associated root system are known to be modeled by certain planar diagrams. We show how…
A set-family ${\cal F}$ is disjointness-compliable if $A' \subseteq A \in {\cal F}$ implies $A' \in {\cal F}$ or $A \setminus A' \in {\cal F}$; if ${\cal F}$ is also symmetric then ${\cal F}$ is proper. A classic result of Goemans and…
Let G be a simple graph with vertex set V(G). A subset S of V(G) is independent if no two vertices from S are adjacent. The graph G is known to be a Konig-Egervary if alpha(G) + mu(G)= |V(G)|, where alpha(G) denotes the size of a maximum…
Algorithms for listing the subgraphs satisfying a given property (e.g.,being a clique, a cut, a cycle, etc.) fall within the general framework of set systems. A set system (U, F) uses a ground set U (e.g., the network nodes) and an…
A family of sets is said to be intersecting if every pair of sets in the family have non-empty intersection. In this paper, we initiate the study of intersecting non-uniform families of sets of one of two sizes containing given subfamilies.…
Two families $\mathcal{F}$ and $\mathcal{G}$ are called cross-intersecting if for every $F\in \mathcal{F}$ and $G\in \mathcal{G}$, the intersection $F\cap G$ is non-empty. It is significant to determine the maximum sum of sizes of…
A proof labelling scheme for a graph class $\mathcal{C}$ is an assignment of certificates to the vertices of any graph in the class $\mathcal{C}$, such that upon reading its certificate and the certificates of its neighbors, every vertex…
A graph is called pseudo-outerplanar if each block has an embedding on the plane in such a way that the vertices lie on a fixed circle and the edges lie inside the disk of this circle with each of them crossing at most one another. In this…
Given a surface with boundary and some points on its boundary, a polygon diagram is a way to connect those points as vertices of non-overlapping polygons on the surface. Such polygon diagrams represent non-crossing permutations on a surface…
Given a family F of subsets of a ground set V, its orthogonal is defined to be the family of subsets that do not overlap any element of F. Using this tool we revisit the problem of designing a simple linear time algorithm for undirected…
Two sets $\mathscr{A}$ and $\mathscr{B}$ are said to be cross-intersecting if $X\cap Y\neq\emptyset$ for all $X\in\mathscr{A}$ and $Y\in\mathscr{B}$. Given two cross-intersecting Sperner families (or antichains) $\mathscr{A}$ and…
We consider families of k-subsets of the standard n-set. Two families F, G are said to be cross-intersecting if every member of F has non-empty intersection with every member of G. A family is called non-trivial if the intersection of all…
For a finite set $P$ of points in the plane in general position, a \emph{crossing family} of size $k$ in $P$ is a collection of $k$ line segments with endpoints in $P$ that are pairwise crossing. It is a long-standing open problem to…
A digraph $D=(V, A)$ has a good pair at a vertex $r$ if $D$ has a pair of arc-disjoint in- and out-branchings rooted at $r$. Let $T$ be a digraph with $t$ vertices $u_1,\dots , u_t$ and let $H_1,\dots H_t$ be digraphs such that $H_i$ has…
For a hypergraph $\mathcal{H}=(X,\mathcal{E})$ a \emph{support} is a graph $G$ on $X$ such that for each $E\in\mathcal{E}$, the induced subgraph of $G$ on the elements in $E$ is connected. If $G$ is planar, we call it a planar support. A…
Our purpose is to study the family of simple undirected graphs whose toric ideal is a complete intersection from both an algorithmic and a combinatorial point of view. We obtain a polynomial time algorithm that, given a graph $G$, checks…
Covariance intersection (CI) methods provide a principled approach to fusing estimates with unknown cross-correlations by minimizing a worst-case measure of uncertainty that is consistent with the available information. This paper…