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Computational determination of the equilibrium state of heterogeneous phospholipid mem-branes is a significant challenge. We wish to explore the rich phase diagram of these multi-component systems. However, the diffusion and mixing times in…

Biological Physics · Physics 2020-10-28 Yevhen K. Cherniavskyi , Arman Fathizadeh , Ron Elber , D. Peter Tieleman

A flat-plate laminar boundary layer is simulated at Mach 6 and unit Reynolds number of 1.1e7 using the Direct Simulation Monte Carlo (DSMC) method to capture and analyze spontaneous second-mode instability growth. Power spectral density…

Fluid Dynamics · Physics 2025-12-15 Mert Senkardesler , Irmak T. Karpuzcu , Deborah A. Levin , Vassilis Theofilis

The nonlinear evolution of collisionless plasmas is typically a multi-scale process where the energy is injected at large, fluid scales and dissipated at small, kinetic scales. Accurately modelling the global evolution requires to take into…

Hydrodynamic simulations have become irreplaceable in modern cosmology for exploring complex systems and making predictions to steer future observations. In Chapter 1, we begin with a philosophical discussion on the role of simulations in…

Cosmology and Nongalactic Astrophysics · Physics 2023-12-20 Edoardo Altamura

We demonstrate that special correlations in the initial conditions of freely evolving, homogeneous magnetohydrodynamic (MHD) turbulence can lead to the formation of enormous current sheets. These coherent structures are observed at the peak…

Fluid Dynamics · Physics 2015-06-18 Vassilios Dallas , Alexandros Alexakis

A numerical study of the Kelvin-Helmholtz instability in compressible magnetohydrodynamics is presented. The three-dimensional simulations consider shear flow in a cylindrical jet configuration, embedded in a uniform magnetic field directed…

Astrophysics · Physics 2009-10-31 R. Keppens , G. Toth

In preparation for an experimental study of magnetorotational instability (MRI) in liquid metal, we present non-ideal two-dimensional magnetohydrodynamic simulations of the nonlinear evolution of MRI in the experimental geometry. The…

Astrophysics · Physics 2009-11-13 Wei Liu , Jeremy Goodman , Hantao Ji

We consider the three-dimensional magnetohydrodynamics system forced by random noise. First, for smooth solutions in the ideal case, the cross helicity remains invariant while the magnetic helicity precisely equals the initial magnetic…

Analysis of PDEs · Mathematics 2024-10-04 Kazuo Yamazaki

The susceptibility of timestepping algorithms to numerical instabilities is an important consideration when simulating partial differential equations (PDEs). Here we identify and analyze a pernicious numerical instability arising in…

Numerical Analysis · Mathematics 2025-03-28 Benjamin A. Hyatt , Daniel Lecoanet , Evan H. Anders , Keaton J. Burns

Magnetohydrodynamics (MHD) describes the interaction between electrically conducting fluids and electromagnetic fields. We propose and analyze a symplectic, second-order algorithm for the evolutionary MHD system in Els\"asser variables. We…

Numerical Analysis · Mathematics 2025-07-18 Zhen Yao , Catalin Trenchea , Wenlong Pei

Magnetohydrodynamics (MHD) couples the Navier--Stokes and Maxwell equations into a nonlinear system of partial differential equations governing stellar interiors, astrophysical jets, fusion plasmas, and space weather. Numerical advances,…

High Energy Astrophysical Phenomena · Physics 2026-05-20 E. A. Huerta

We investigate how the accuracy and stability of numerical relativity simulations of 1D colliding plane waves depends on choices of equation formulations, gauge conditions, boundary conditions, and numerical methods, all in the context of a…

General Relativity and Quantum Cosmology · Physics 2009-11-07 J. M. Bardeen , L. T. Buchman

Global three dimensional magnetohydrodynamic (MHD) simulations of turbulent accretion disks are presented which start from fully equilibrium initial conditions in which the magnetic forces are accounted for and the induction equation is…

High Energy Astrophysical Phenomena · Physics 2015-06-12 E. R. Parkin , G. V. Bicknell

Extensive studies have investigated the transition mechanism of boundary layers initiated by a single primary instability. In a real-world scenario, however, multiple primary instabilities of different physical nature would coexist and…

Fluid Dynamics · Physics 2026-03-18 Xiao-Bai Li , Yifeng Chen , Chihyung Wen , Peixu Guo

The design of inertial fusion experiments is a complex task as driver energy must be delivered in a precise manner to a structured target to achieve a fast, but hydrodynamically stable, implosion. Radiation-hydrodynamics simulation codes…

Plasma Physics · Physics 2025-08-29 A. J. Crilly , P. W. Moloney , D. Shi , E. A. Ferdinandi

The stability of nonaxisymmetric perturbations in differentially rotating astrophysical accretion disks is analyzed by fully incorporating the properties of shear flows. We verify the presence of discrete unstable eigenmodes with complex…

Astrophysics · Physics 2009-10-31 K. Noguchi , T. Tajima , R. Matsumoto

This paper describes a numerical scheme for multi-fluid hydrodynamics in the limit of small mass densities of the charged particles. The inertia of the charged particles can then be neglected, which makes it possible to write an evolution…

Astrophysics · Physics 2009-11-10 S. A. E. G. Falle

We review a dynamical approach to non-equilibrium MD (D-NEMD). We show how, using a proper simulation setup, is possible to treat interesting cases in which the initial condition is a stationary non-equilibrium state produced by a suitable…

Computational Physics · Physics 2015-05-27 Sergio Orlandini , Simone Meloni , Giovanni Ciccotti

The 2D second-mode is a potent instability in hypersonic boundary layers (HBLs). We study its linear and nonlinear evolution, followed by its role in transition and eventual breakdown of the HBL into a fully turbulent state. Linear…

Fluid Dynamics · Physics 2020-12-02 S. Unnikrishnan , Datta V. Gaitonde

Many linear stability aspects in plasmas are heavily influenced by non-ideal effects beyond the basic ideal magnetohydrodynamics (MHD) description. Here, the extension of the modern open-source MHD spectroscopy code Legolas with viscosity…

Plasma Physics · Physics 2022-07-13 Jordi De Jonghe , Niels Claes , Rony Keppens