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We show that the information gained in spectroscopic experiments regarding the number and distribution of atomic environments can be used as a valuable constraint in the refinement of the atomic-scale structures of nanostructured or…

Materials Science · Physics 2015-05-14 Matthew J Cliffe , Martin T. Dove , D. A. Drabold , Andrew L. Goodwin

Optical spectroscopy is indispensable for research and development in nanoscience and nanotechnology, microelectronics, energy, and advanced manufacturing. Advanced optical spectroscopy tools often require both specifically designed…

Optics · Physics 2022-10-12 Ziyang Wang , Yuxuan Cosmi Lin , Kunyan Zhang , Wenjing Wu , Shengxi Huang

Empirical scoring functions based on either molecular force fields or cheminformatics descriptors are widely used, in conjunction with molecular docking, during the early stages of drug discovery to predict potency and binding affinity of a…

Machine Learning · Computer Science 2017-03-31 Joseph Gomes , Bharath Ramsundar , Evan N. Feinberg , Vijay S. Pande

Active learning aims to select the minimum amount of data to train a model that performs similarly to a model trained with the entire dataset. We study the potential of active learning for image segmentation in underwater infrastructure…

Computer Vision and Pattern Recognition · Computer Science 2024-03-22 Luiza Ribeiro Marnet , Yury Brodskiy , Stella Grasshof , Andrzej Wasowski

Atom probe tomography (APT) is ideally suited to characterize and understand the interplay of chemical segregation and microstructure in modern multicomponent materials. Yet, the quantitative analysis typically relies on human expertise to…

We present new algorithms for adaptively learning artificial neural networks. Our algorithms (AdaNet) adaptively learn both the structure of the network and its weights. They are based on a solid theoretical analysis, including…

Machine Learning · Computer Science 2017-03-01 Corinna Cortes , Xavi Gonzalvo , Vitaly Kuznetsov , Mehryar Mohri , Scott Yang

In the recent past, there have been many efforts to accelerate adaptive beamforming for ultrasound (US) imaging using neural networks (NNs). However, most of these efforts are based on static models, i.e., they are trained to learn a single…

Signal Processing · Electrical Eng. & Systems 2022-08-02 Mayank Katare , Mahesh Raveendranatha Panicker , A N Madhavanunni , Gayathri Malamal

Some perspectives naturally provide more information than others. How can an AI system determine which viewpoint offers the most valuable insight for accurate and efficient 3D object reconstruction? Active view selection (AVS) for 3D…

Computer Vision and Pattern Recognition · Computer Science 2026-02-25 Zhengquan Zhang , Feng Xu , Mengmi Zhang

AtomAI is an open-source software package bridging instrument-specific Python libraries, deep learning, and simulation tools into a single ecosystem. AtomAI allows direct applications of the deep convolutional neural networks for atomic and…

Data Analysis, Statistics and Probability · Physics 2022-12-29 Maxim Ziatdinov , Ayana Ghosh , Tommy Wong , Sergei V. Kalinin

Structural coloration is commonly modeled using wave optics for reliable and photorealistic rendering of natural, quasi-periodic and complex nanostructures. Such models often rely on dense, preliminary or preprocessed data to accurately…

Graphics · Computer Science 2025-07-03 Narayan Kandel , Daljit Singh J. S. Dhillon

Coherent X-ray scattering techniques are critical for investigating the fundamental structural properties of materials at the nanoscale. While advancements have made these experiments more accessible, real-time analysis remains a…

Machine Learning · Computer Science 2025-07-21 Aileen Luo , Tao Zhou , Ming Du , Martin V. Holt , Andrej Singer , Mathew J. Cherukara

Machine Learning (ML) has the potential to accelerate discovery of new materials and shed light on useful properties of existing materials. A key difficulty when applying ML in Materials Science is that experimental datasets of material…

Volumetric crystal structure indexing and orientation mapping are key data processing steps for virtually any quantitative study of spatial correlations between the local chemistry and the microstructure of a material. For electron and…

Computational Physics · Physics 2020-09-03 Markus Kühbach , Matthew Kasemer , Baptiste Gault , Andrew Breen

Eficient, physically-inspired descriptors of the structure and composition of molecules and materials play a key role in the application of machine-learning techniques to atomistic simulations. The proliferation of approaches, as well as…

Computational Physics · Physics 2020-12-11 Alexander Goscinski , Guillaume Fraux , Giulio Imbalzano , Michele Ceriotti

We propose a general purpose active learning algorithm for structured prediction, gathering labeled data for training a model that outputs a set of related labels for an image or video. Active learning starts with a limited initial training…

Computer Vision and Pattern Recognition · Computer Science 2017-06-16 Mehran Khodabandeh , Zhiwei Deng , Mostafa S. Ibrahim , Shinichi Satoh , Greg Mori

Constructing decision trees online is a classical machine learning problem. Existing works often assume that features are readily available for each incoming data point. However, in many real world applications, both feature values and the…

Machine Learning · Computer Science 2025-06-18 Arman Rahbar , Ziyu Ye , Yuxin Chen , Morteza Haghir Chehreghani

Atomic electron tomography (AET) determines the three-dimensional (3D) coordinates and chemical identities of individual atoms from a series of scanning transmission electron microscopy images taken at different tilt angles. However, under…

Materials Science · Physics 2026-03-23 Yao Zhang , Lanyi Cao , Zhen Sun , Jihan Zhou

Detection of cell nuclei in microscopic images is a challenging research topic, because of limitations in cellular image quality and diversity of nuclear morphology, i.e. varying nuclei shapes, sizes, and overlaps between multiple cell…

Computer Vision and Pattern Recognition · Computer Science 2018-07-10 Mohammad Tofighi , Tiantong Guo , Jairam K. P. Vanamala , Vishal Monga

We present SCULPT (Supervised Clustering and Uncovering Latent Patterns with Training), a comprehensive software platform for analyzing tabulated high-dimensional multi-particle coincidence data from Cold Target Recoil Ion Momentum…

Atomic and Molecular Clusters · Physics 2026-05-20 Hazem Daoud , Sarvesh Kumar , Jin Qian , Tanny Chavez , Daniel Slaughter , Thorsten Weber

A new semi-supervised machine learning method for the discovery of structure-spectrum relationships is developed and demonstrated using the specific example of interpreting X-ray absorption near-edge structure (XANES) spectra. This method…

Materials Science · Physics 2023-05-17 Zhu Liang , Matthew R. Carbone , Wei Chen , Fanchen Meng , Eli Stavitski , Deyu Lu , Mark S. Hybertsen , Xiaohui Qu
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