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Data for human-human spoken dialogues for research and development are currently very limited in quantity, variety, and sources; such data are even scarcer in healthcare. In this work, we investigate fast prototyping of a dialogue…

While the efficacy of deep learning models heavily relies on data, gathering and annotating data for specific tasks, particularly when addressing novel or sensitive subjects lacking relevant datasets, poses significant time and resource…

Computer Vision and Pattern Recognition · Computer Science 2025-06-25 Quang-Binh Nguyen , Trong-Vu Hoang , Ngoc-Do Tran , Tam V. Nguyen , Minh-Triet Tran , Trung-Nghia Le

$\textbf{Objective}$ Develop an automatic diagnostic system which only uses textual admission information from Electronic Health Records (EHRs) and assist clinicians with a timely and statistically proved decision tool. The hope is that the…

Computation and Language · Computer Science 2017-12-08 Christy Li , Dimitris Konomis , Graham Neubig , Pengtao Xie , Carol Cheng , Eric Xing

Artificial Intelligence has revolutionised critical care for common conditions. Yet, rare conditions in the intensive care unit (ICU), including recognised rare diseases and low-prevalence conditions in the ICU, remain underserved due to…

Machine Learning · Computer Science 2025-07-10 Mingcheng Zhu , Yu Liu , Zhiyao Luo , Tingting Zhu

Facial analysis technologies have recently measured up to the capabilities of expert clinicians in syndrome identification. To date, these technologies could only identify phenotypes of a few diseases, limiting their role in clinical…

Computer Vision and Pattern Recognition · Computer Science 2018-01-24 Yaron Gurovich , Yair Hanani , Omri Bar , Nicole Fleischer , Dekel Gelbman , Lina Basel-Salmon , Peter Krawitz , Susanne B Kamphausen , Martin Zenker , Lynne M. Bird , Karen W. Gripp

High-throughput phenotyping automates the mapping of patient signs to standardized ontology concepts and is essential for precision medicine. This study evaluates the automation of phenotyping of clinical summaries from the Online Mendelian…

Computation and Language · Computer Science 2025-06-11 Daniel B. Hier , S. Ilyas Munzir , Anne Stahlfeld , Tayo Obafemi-Ajayi , Michael D. Carrithers

This research addresses the issue of missing structured data in dental records by extracting diagnostic information from unstructured text. The updated periodontology classification system's complexity has increased incomplete or missing…

Computation and Language · Computer Science 2025-06-04 Yao-Shun Chuang , Chun-Teh Lee , Oluwabunmi Tokede , Guo-Hao Lin , Ryan Brandon , Trung Duong Tran , Xiaoqian Jiang , Muhammad F. Walji

Background and Significance: Selecting cohorts for a clinical trial typically requires costly and time-consuming manual chart reviews resulting in poor participation. To help automate the process, National NLP Clinical Challenges (N2C2)…

Computation and Language · Computer Science 2019-02-27 Samarth Rawal , Ashok Prakash , Soumya Adhya , Sidharth Kulkarni , Saadat Anwar , Chitta Baral , Murthy Devarakonda

Single-cell RNA sequencing has transformed our ability to identify diverse cell types and their transcriptomic signatures. However, annotating these signatures-especially those involving poorly characterized genes-remains a major challenge.…

Named entity recognition (NER) and relation extraction (RE) are two important tasks in information extraction and retrieval (IE \& IR). Recent work has demonstrated that it is beneficial to learn these tasks jointly, which avoids the…

Computation and Language · Computer Science 2020-01-01 John Giorgi , Xindi Wang , Nicola Sahar , Won Young Shin , Gary D. Bader , Bo Wang

Deep learning enables the development of efficient end-to-end speech processing applications while bypassing the need for expert linguistic and signal processing features. Yet, recent studies show that good quality speech resources and…

Audio and Speech Processing · Electrical Eng. & Systems 2020-09-16 Adriana Stan

For the task of fine-grained entity typing (FET), due to the use of a large number of entity types, it is usually considered too costly to manually annotating a training dataset that contains an ample number of examples for each type. A…

Computation and Language · Computer Science 2023-12-12 Hongliang Dai , Ziqian Zeng

Artificial intelligence (AI)-enabled diagnostics in maxillofacial pathology require structured, high-quality multimodal datasets. However, existing resources provide limited ameloblastoma coverage and lack the format consistency needed for…

Artificial Intelligence · Computer Science 2026-02-06 Ajo Babu George , Anna Mariam John , Athul Anoop , Balu Bhasuran

Revealing novel insights from the relationship between molecular measurements and pathology remains a very impactful application of machine learning in biomedicine. Data in this domain typically contain only a few observations but thousands…

Machine Learning · Computer Science 2026-03-31 Christopher Kolberg , Jules Kreuer , Jonas Huurdeman , Sofiane Ouaari , Katharina Eggensperger , Nico Pfeifer

Effective human-AI interaction relies on AI's ability to accurately perceive and interpret human emotions. Current benchmarks for vision and vision-language models are severely limited, offering a narrow emotional spectrum that overlooks…

Computer Vision and Pattern Recognition · Computer Science 2025-05-28 Christoph Schuhmann , Robert Kaczmarczyk , Gollam Rabby , Felix Friedrich , Maurice Kraus , Krishna Kalyan , Kourosh Nadi , Huu Nguyen , Kristian Kersting , Sören Auer

Unstructured clinical text in EHRs contains crucial information for applications including decision support, trial matching, and retrospective research. Recent work has applied BERT-based models to clinical information extraction and text…

Computation and Language · Computer Science 2020-11-13 Kexin Huang , Sankeerth Garapati , Alexander S. Rich

Domain-specific intelligence demands specialized knowledge and sophisticated reasoning for problem-solving, posing significant challenges for large language models (LLMs) that struggle with knowledge hallucination and inadequate reasoning…

Computation and Language · Computer Science 2025-05-20 Zhengren Wang , Jiayang Yu , Dongsheng Ma , Zhe Chen , Yu Wang , Zhiyu Li , Feiyu Xiong , Yanfeng Wang , Weinan E , Linpeng Tang , Wentao Zhang

State-of-the-art text-to-image (T2I) diffusion models often struggle to generate rare compositions of concepts, e.g., objects with unusual attributes. In this paper, we show that the compositional generation power of diffusion models on…

Machine Learning · Computer Science 2025-09-30 Dongmin Park , Sebin Kim , Taehong Moon , Minkyu Kim , Kangwook Lee , Jaewoong Cho

Single-cell RNA sequencing (scRNA-seq) has the potential to provide powerful, high-resolution signatures to inform disease prognosis and precision medicine. This paper takes an important first step towards this goal by developing an…

Quantitative Methods · Quantitative Biology 2021-10-15 Bryan He , Matthew Thomson , Meena Subramaniam , Richard Perez , Chun Jimmie Ye , James Zou

Accurate and interpretable image-based diagnosis remains a fundamental challenge in medical AI, particularly under domain shifts and rare-class conditions. Deep learning models often struggle with real-world distribution changes, exhibit…

Machine Learning · Computer Science 2025-12-13 Midhat Urooj , Ayan Banerjee , Farhat Shaikh , Kuntal Thakur , Sandeep Gupta
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