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The innate immune system in insects consists of a conserved core signaling network and rapidly diversifying effector and recognition components, often containing a high proportion of taxonomically-restricted genes. In the absence of…

Genomics · Quantitative Biology 2014-06-10 Timothy B. Sackton , John H. Werren , Andrew G. Clark

Bacteriophages, which are viruses infecting bacteria, are the most ubiquitous and diverse entities in the biosphere. There is accumulating evidence revealing their important roles in shaping the structure of various microbiomes. Thanks to…

Genomics · Quantitative Biology 2022-11-24 Yilin Zhu , Jiayu Shang , Cheng Peng , Yanni Sun

Community science observational datasets are useful in epidemiology and ecology for modeling species distributions, but the heterogeneous nature of the data presents significant challenges for standardization, data quality assurance and…

Populations and Evolution · Quantitative Biology 2025-12-10 Richard Littauer , Kris Bubendorfer

Addressing plant diseases and pests is critical for enhancing crop production and preventing economic losses. Recent advances in artificial intelligence (AI), machine learning (ML), and deep learning (DL) have significantly improved the…

Computer Vision and Pattern Recognition · Computer Science 2025-08-13 Saptarshi Banerjee , Tausif Mallick , Amlan Chakroborty , Himadri Nath Saha , Nityananda T. Takur

Mosquito-borne diseases (MBDs), such as dengue virus, chikungunya virus, and West Nile virus, cause over one million deaths globally every year. Because many such diseases are spread by the Aedes and Culex mosquitoes, tracking these larvae…

Computer Vision and Pattern Recognition · Computer Science 2022-09-19 Aswin Surya , David B. Peral , Austin VanLoon , Akhila Rajesh

Monitoring the number of insect pests is a crucial component in pheromone-based pest management systems. In this paper, we propose an automatic detection pipeline based on deep learning for identifying and counting pests in images taken…

Computer Vision and Pattern Recognition · Computer Science 2016-02-25 Weiguang Ding , Graham Taylor

Monitoring benthic biodiversity in Antarctica is vital for understanding ecological change in response to climate-driven pressures. This work is typically performed using high-resolution imagery captured in situ, though manual annotation of…

Computer Vision and Pattern Recognition · Computer Science 2025-07-30 Cameron Trotter , Huw Griffiths , Tasnuva Ming Khan , Rowan Whittle

Automatic detection of parasitic eggs in microscopy images has the potential to increase the efficiency of human experts whilst also providing an objective assessment. The time saved by such a process would both help ensure a prompt…

Computer Vision and Pattern Recognition · Computer Science 2022-03-08 Perla Mayo , Nantheera Anantrasirichai , Thanarat H. Chalidabhongse , Duangdao Palasuwan , Alin Achim

Insects play such a crucial role in ecosystems that a shift in demography of just a few species can have devastating consequences at environmental, social and economic levels. Despite this, evaluation of insect demography is strongly…

Computer Vision and Pattern Recognition · Computer Science 2022-11-04 Léonard Boussioux , Tomás Giro-Larraz , Charles Guille-Escuret , Mehdi Cherti , Balázs Kégl

Planktonic organisms are key components of aquatic ecosystems and respond quickly to changes in the environment, therefore their monitoring is vital to understand the changes in the environment. Yet, monitoring plankton at appropriate…

Leishmaniasis is considered a neglected disease that causes thousands of deaths annually in some tropical and subtropical countries. There are various techniques to diagnose leishmaniasis of which manual microscopy is considered to be the…

Computer Vision and Pattern Recognition · Computer Science 2019-01-01 Marc Górriz , Albert Aparicio , Berta Raventós , Verónica Vilaplana , Elisa Sayrol , Daniel López-Codina

Object grasping is critical for many applications, which is also a challenging computer vision problem. However, for the clustered scene, current researches suffer from the problems of insufficient training data and the lacking of…

Computer Vision and Pattern Recognition · Computer Science 2020-01-03 Hao-Shu Fang , Chenxi Wang , Minghao Gou , Cewu Lu

Intestinal parasitic infections, as a leading causes of morbidity worldwide, still lacks time-saving, high-sensitivity and user-friendly examination method. The development of deep learning technique reveals its broad application potential…

Computer Vision and Pattern Recognition · Computer Science 2022-07-05 Yuqi Wang , Zhiqiang He , Shenghui Huang , Huabin Du

Agriculture is the mainstay of human society because it is an essential need for every organism. Paddy cultivation is very significant so far as humans are concerned, largely in the Asian continent, and it is one of the staple foods.…

Computer Vision and Pattern Recognition · Computer Science 2022-08-09 Petchiammal A , Briskline Kiruba S , D. Murugan

Insect monitoring is crucial for understanding the consequences of rapid ecological changes, but taxa identification currently requires tedious manual expert work and cannot be scaled-up efficiently. Deep convolutional neural networks…

Computer Vision and Pattern Recognition · Computer Science 2021-01-07 Fahad Sohrab , Jenni Raitoharju

The purpose of the Insect Detection System for Crop and Plant Health is to keep an eye out for and identify insect infestations in farming areas. By utilizing cutting-edge technology like computer vision and machine learning, the system…

Computer Vision and Pattern Recognition · Computer Science 2024-06-13 Md. Mahmudul Hasan , SM Shaqib , Ms. Sharmin Akter , Rabiul Alam , Afraz Ul Haque , Shahrun akter khushbu

Phytoplankton parasites are largely understudied microbial components with a potentially significant ecological impact on phytoplankton bloom dynamics. To better understand their impact, we need improved detection methods to integrate…

This paper introduces a novel dataset FeatherV1, containing 28,272 images of feathers categorized by 595 bird species. It was created to perform taxonomic identification of bird species by a single feather, which can be applied in amateur…

Computer Vision and Pattern Recognition · Computer Science 2020-04-21 Alina Belko , Konstantin Dobratulin , Andrey Kuznetsov

Automated livestock monitoring is crucial for precision farming, but robust computer vision models are hindered by a lack of datasets reflecting real-world group challenges. We introduce the 8-Calves dataset, a challenging benchmark for…

Computer Vision and Pattern Recognition · Computer Science 2025-10-24 Xuyang Fang , Sion Hannuna , Neill Campbell , Edwin Simpson

Pumpkin leaf diseases are significant threats to agricultural productivity, requiring a timely and precise diagnosis for effective management. Traditional identification methods are laborious and susceptible to human error, emphasizing the…

Computer Vision and Pattern Recognition · Computer Science 2025-04-11 Md. Arafat Alam Khandaker , Ziyan Shirin Raha , Shifat Islam , Tashreef Muhammad
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