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Related papers: Dielectric response in proteins: The proteotronics…

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This work exploits the zeptoliter sensing volume of electrolyte-filled nanopores to determine, simultaneously and in real time, the approximate shape, volume, charge, rotational diffusion coefficient, and dipole moment of individual…

We present the frequency- and temperature-dependent dielectric properties of lysozyme solutions in a broad concentration regime, measured at subzero temperatures and compare the results with measurements above the freezing point of water…

Soft Condensed Matter · Physics 2015-10-01 M. Wolf , S. Emmert , R. Gulich , P. Lunkenheimer , A. Loidl

The dielectric permittivity of salt water decreases on dissolving more salt. For nearly a century, this phenomenon has been explained by invoking saturation in the dielectric response of the solvent water molecules. Herein, we employ an…

Soft Condensed Matter · Physics 2023-07-11 Chunyi Zhang , Shuwen Yue , Athanassios Z. Panagiotopoulos , Michael L. Klein , Xifan Wu

We present a novel approach that allows to calculate the dielectric response of periodic systems in the quantum Monte Carlo formalism. We employ a many-body generalization for the electric enthalpy functional, where the coupling with the…

Other Condensed Matter · Physics 2009-11-11 P. Umari , A. J. Williamson , Giulia Galli , Nicola Marzari

Since the pioneering works of Pethig, Grant and Wuthrich on protein hydration layer, many studies have been devoted to find out if there are any general and universal characteristic features that can distinguish water molecules inside the…

Soft Condensed Matter · Physics 2017-08-09 Saumyak Mukherjee , Sayantan Mondal , Biman Bagchi

Protein activity is a significant characteristic for recombinant proteins which can be used as biocatalysts. High activity of proteins reduces the cost of biocatalysts. A model that can predict protein activity from amino acid sequence is…

Quantitative Methods · Quantitative Biology 2018-07-23 X. Han , X. Wang , K. Zhou

Phase-separated biomolecular condensates containing proteins and RNAs can assemble into higher-order structures by forming thermodynamically stable interfaces between immiscible phases. Using a minimal model of a protein/RNA interaction…

Soft Condensed Matter · Physics 2024-07-31 Tianhao Li , William M. Jacobs

The plant bioelectric potential is believed to be a suitable real-time and noninvasive method that can be used to evaluate plant activities, such as the photosynthetic reaction. The amplitude of the bioelectric potential response when…

Signal Processing · Electrical Eng. & Systems 2019-08-28 Ki Ando , Hiroshi Igarashi , Hiroyuki Shinoda , Nobuki Mutsukura

We describe the static dielectric response of ferroelastic-dielectric microcomposites. Its dependence on temperature, pressure and concentration is considered for smaller concentrations and for temperatures above the critical temperature.…

Materials Science · Physics 2007-05-23 O. Hudak , W. Schranz

We introduce a simulation strategy to consistently couple continuum biomembrane dynamics to the motion of discrete biological macromolecules residing within or on the membrane. The methodology is used to study the diffusion of integral…

Soft Condensed Matter · Physics 2009-05-26 Ali Naji , Paul J. Atzberger , Frank L. H. Brown

In this work, the inverse problem of quantitative thermoacoustic tomography is studied. In quantitative thermoacoustic tomography, dielectric parameters of an imaged target are estimated from an absorbed energy density induced by an…

Computational Physics · Physics 2024-10-10 Teemu Sahlström , Timo Lähivaara , Tanja Tarvainen

We present a novel statistical mechanics formalism for the theoretical description of the process of protein folding$\leftrightarrow$unfolding transition in water environment. The formalism is based on the construction of the partition…

Biological Physics · Physics 2010-05-20 A. V. Yakubovich , A. V. Solov'yov , W. Greiner

The density of a protein molecule is a key property within a variety of experimental techniques. We present a computational method for determining protein mass density that explicitly incorporates hydration effects. Our approach uses…

We present extensive Molecular Dynamics simulation results for the structure, static and dynamical response of a droplet of 1000 soft spheres carrying extended dipoles and confined to spherical cavities of radii $R=2.5$, 3, and 4 nm…

Soft Condensed Matter · Physics 2009-11-11 Ronald Blaak , Jean-Pierre Hansen

Interrelations of domain wall (extrinsic) contributions to dielectric, piezoelectric and mechanical properties of ferroic samples are a hot subject of both theoretical and experimental research. Recently,we have derived theoretical formulas…

Materials Science · Physics 2007-05-23 A. Kopal , P. Mokry

Intersubband response in a superlattice subjected to a homogeneous electric field (biased superlattice with equipopulated levels) is studied within the tight-binding approximation, taking into account the interplay between homogeneous and…

Other Condensed Matter · Physics 2009-11-13 A. Hernández-Cabrera , P. Aceituno , F. T. Vasko

The rovibrational electric dipole transitions in the ground electronic state of the HD molecule are studied. A simple, yet rigorous formula is derived for the transition rates in terms of the electric dipole moment function $D(R)$, which is…

Chemical Physics · Physics 2009-11-13 Krzysztof Pachucki , Jacek Komasa

The evolution of the interface between two ideal dielectric liquids in a strong vertical electric field is studied. It is found that a particular flow regime, for which the velocity potential and the electric field potential are linearly…

Fluid Dynamics · Physics 2009-11-11 Nikolay M. Zubarev

Motivation: Protein interactions are fundamental building blocks of biochemical reaction systems underlying cellular functions. The complexity and functionality of such systems emerge not from the protein interactions themselves but from…

Molecular Networks · Quantitative Biology 2011-06-15 Johannes Köster , Eli Zamir , Sven Rahmann

This paper tests a dielectric model for variation of hydration free energy with geometry of complex solutes in water. It works out some basic aspects of the theory of boundary integral methods for these problems. One aspect of the…

chem-ph · Physics 2008-02-03 L. R. Pratt , G. J. Tawa , G. Hummer , A. E. Garcia , S. A. Corcelli
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