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Directed evolution as a widely-used engineering strategy faces obstacles in finding desired mutants from the massive size of candidate modifications. While deep learning methods learn protein contexts to establish feasible searching space,…

Quantitative Methods · Quantitative Biology 2023-04-18 Bingxin Zhou , Outongyi Lv , Kai Yi , Xinye Xiong , Pan Tan , Liang Hong , Yu Guang Wang

Plant breeding and variety trials are usually conducted in multiple environments sampled from a defined target population of environments in order to characterize the performance of breeding lines or varieties. When the population is large…

Applications · Statistics 2026-05-01 Maryna Prus , Lenka Filová , Hans-Peter Piepho , Waqas Ahmed Malik

Precise crop yield predictions are of national importance for ensuring food security and sustainable agricultural practices. While AI-for-science approaches have exhibited promising achievements in solving many scientific problems such as…

Machine Learning · Computer Science 2024-06-18 Fudong Lin , Kaleb Guillot , Summer Crawford , Yihe Zhang , Xu Yuan , Nian-Feng Tzeng

Accurate prediction of agricultural crop prices is a crucial input for decision-making by various stakeholders in agriculture: farmers, consumers, retailers, wholesalers, and the Government. These decisions have significant implications…

Machine Learning · Computer Science 2023-04-20 Mayank Ratan Bhardwaj , Jaydeep Pawar , Abhijnya Bhat , Deepanshu , Inavamsi Enaganti , Kartik Sagar , Y. Narahari

Genotype-to-Phenotype (G2P) prediction plays a pivotal role in crop breeding, enabling the identification of superior genotypes based on genomic data. Rice (Oryza sativa), one of the most important staple crops, faces challenges in…

Genomics · Quantitative Biology 2025-03-17 Yunxuan Dong , Siyuan Chen , Jisen Zhang

Accurate prediction of grape phenology is essential for timely vineyard management decisions, such as scheduling irrigation and fertilization, to maximize crop yield and quality. While traditional biophysical models calibrated on historical…

Machine Learning · Computer Science 2025-08-07 William Solow , Sandhya Saisubramanian

Early identification of drought stress in crops is vital for implementing effective mitigation measures and reducing yield loss. Non-invasive imaging techniques hold immense potential by capturing subtle physiological changes in plants…

Computer Vision and Pattern Recognition · Computer Science 2025-01-14 Aswini Kumar Patra , Lingaraj Sahoo

Crop yield is a highly complex trait determined by multiple factors such as genotype, environment, and their interactions. Accurate yield prediction requires fundamental understanding of the functional relationship between yield and these…

Machine Learning · Computer Science 2019-06-12 Saeed Khaki , Lizhi Wang

Availability of an explainable deep learning model that can be applied to practical real world scenarios and in turn, can consistently, rapidly and accurately identify specific and minute traits in applicable fields of biological sciences,…

Water is essential for agricultural productivity. Assessing water shortages and reduced yield potential is a critical factor in decision-making for ensuring agricultural productivity and food security. Crop simulation models, which align…

Machine Learning · Computer Science 2025-10-22 Miro Miranda , Marcela Charfuelan , Matias Valdenegro Toro , Andreas Dengel

Plant breeding underpins global food security through incremental, accumulating improvements in crop yield, quality and sustainability, achieved via repeated cycles of crop ranking, selection and crossing. Climate change disrupts this…

Machine Learning · Computer Science 2026-05-07 Aike Potze , Fred van Eeuwijk , Ioannis N. Athanasiadis

Accurate prediction of crop yield is critical for supporting food security, agricultural planning, and economic decision-making. However, yield forecasting remains a significant challenge due to the complex and nonlinear relationships…

Applications · Statistics 2026-04-09 Yeonjoo Park , Bo Li , Yehua Li

Cold temperatures during fall and spring have the potential to cause frost damage to grapevines and other fruit plants, which can significantly decrease harvest yields. To help prevent these losses, farmers deploy expensive frost mitigation…

Machine Learning · Computer Science 2023-01-06 Aseem Saxena , Paola Pesantez-Cabrera , Rohan Ballapragada , Kin-Ho Lam , Markus Keller , Alan Fern

Increasing the accuracy of crop yield estimates may allow improvements in the whole crop production chain, allowing farmers to better plan for harvest, and for insurers to better understand risks of production, to name a few advantages. To…

Applications · Statistics 2020-07-23 Renato Luiz de Freitas Cunha , Bruno Silva

Precision agriculture involves the application of advanced technologies to improve agricultural productivity, efficiency, and profitability while minimizing waste and environmental impact. Deep learning approaches enable automated…

Computer Vision and Pattern Recognition · Computer Science 2024-05-14 Alireza Ghanbari , Gholamhassan Shirdel , Farhad Maleki

Crop breeding is crucial in improving agricultural productivity while potentially decreasing land usage, greenhouse gas emissions, and water consumption. However, breeding programs are challenging due to long turnover times,…

This study introduces RicEns-Net, a novel Deep Ensemble model designed to predict crop yields by integrating diverse data sources through multimodal data fusion techniques. The research focuses specifically on the use of synthetic aperture…

Image and Video Processing · Electrical Eng. & Systems 2025-02-11 Akshay Dagadu Yewle , Laman Mirzayeva , Oktay Karakuş

Detecting stress in plants is crucial for both open-farm and controlled-environment agriculture. Biomolecules within plants serve as key stress indicators, offering vital markers for continuous health monitoring and early disease detection.…

Applying agrochemicals is the default procedure for conventional weed control in crop production, but has negative impacts on the environment. Robots have the potential to treat every plant in the field individually and thus can reduce the…

Computer Vision and Pattern Recognition · Computer Science 2018-06-12 Philipp Lottes , Jens Behley , Nived Chebrolu , Andres Milioto , Cyrill Stachniss

Biotic stress consists of damage to plants through other living organisms. Efficient control of biotic agents such as pests and pathogens (viruses, fungi, bacteria, etc.) is closely related to the concept of agricultural sustainability.…

Computer Vision and Pattern Recognition · Computer Science 2019-07-29 J. G. M. Esgario , R. A. Krohling , J. A. Ventura