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Knots are deeply entangled with every branch of science. One of the biggest open challenges in knot theory is to formalise a knot invariant that can unambiguously and efficiently distinguish any two knotted curves. Additionally, the…

Supervised machine learning (ML) methods are emerging as valid alternatives to standard mathematical methods for identifying knots in long, collapsed polymers. Here, we introduce a hybrid supervised/unsupervised ML approach for knot…

Statistical Mechanics · Physics 2025-12-04 Anna Braghetto , Sumanta Kundu , Marco Baiesi , Enzo Orlandini

Knotted molecules occur naturally and are designed by scientists to gain special biological and material properties. Understanding and utilizing knotting require efficient methods to recognize and generate knotted structures, which are…

Computational Physics · Physics 2025-01-23 Zhiyu Zhang , Yongjian Zhu , Liang Dai

Two geometric spaces are in the same topological class if they are related by certain geometric deformations. We propose machine learning methods that automate learning of topological invariance and apply it in the context of knot theory,…

Geometric Topology · Mathematics 2025-04-18 James Halverson , Fabian Ruehle

Manifold learning (ML) aims to seek low-dimensional embedding from high-dimensional data. The problem is challenging on real-world datasets, especially with under-sampling data, and we find that previous methods perform poorly in this case.…

Machine Learning · Computer Science 2022-07-27 Zelin Zang , Siyuan Li , Di Wu , Ge Wang , Lei Shang , Baigui Sun , Hao Li , Stan Z. Li

In this article we discuss applications of neural networks to recognising knots and, in particular, to the unknotting problem. One of motivations for this study is to understand how neural networks work on the example of a problem for which…

Geometric Topology · Mathematics 2022-11-28 L. H. Kauffman , N. E. Russkikh , I. A. Taimanov

Machine learning (ML) entered the field of computational micromagnetics only recently. The main objective of these new approaches is the automatization of solutions of parameter-dependent problems in micromagnetism such as fast response…

Computational Physics · Physics 2021-07-15 Sebastian Schaffer , Norbert J. Mauser , Thomas Schrefl , Dieter Suess , Lukas Exl

The efficient classification of different types of supernova is one of the most important problems for observational cosmology. However, spectroscopic confirmation of most objects in upcoming photometric surveys, such as the The Rubin…

Cosmology and Nongalactic Astrophysics · Physics 2020-08-17 Marcelo Vargas dos Santos , Miguel Quartin , Ribamar R. R. Reis

Numerous phenomenological nuclear models have been proposed to describe specific observables within different regions of the nuclear chart. However, developing a unified model that describes the complex behavior of all nuclei remains an…

Nuclear Theory · Physics 2025-05-14 Jose M. Munoz , Silviu M. Udrescu , Ronald F. Garcia Ruiz

This paper proposes a machine learning (ML) method to predict stable molecular geometries from their chemical composition. The method is useful for generating molecular conformations which may serve as initial geometries for saving time…

Shortcut learning is a phenomenon where machine learning models prioritize learning simple, potentially misleading cues from data that do not generalize well beyond the training set. While existing research primarily investigates this in…

Image and Video Processing · Electrical Eng. & Systems 2024-06-28 Manxi Lin , Nina Weng , Kamil Mikolaj , Zahra Bashir , Morten Bo Søndergaard Svendsen , Martin Tolsgaard , Anders Nymark Christensen , Aasa Feragen

Supervised manifold learning methods learn data representations by preserving the geometric structure of data while enhancing the separation between data samples from different classes. In this work, we propose a theoretical study of…

Machine Learning · Computer Science 2018-01-08 Elif Vural , Christine Guillemot

We consider the problem of distinguishing two vectors (visualized as images or barcodes) and learning if they are related to one another. For this, we develop a geometric quantum machine learning (GQML) approach with embedded symmetries…

Quantum Physics · Physics 2024-09-04 Chukwudubem Umeano , Stefano Scali , Oleksandr Kyriienko

First-principles computations are the driving force behind numerous discoveries of hydride-based superconductors, mostly at high pressures, during the last decade. Machine-learning (ML) approaches can further accelerate the future…

Superconductivity · Physics 2023-06-01 Huan Tran , Tuoc N. Vu

Non-classical correlations can be regarded as resources for quantum information processing. However, the classification problem of non-classical correlations for quantum states remains a challenge, even for finite-size systems. Although…

We study the problem of learning local metrics for nearest neighbor classification. Most previous works on local metric learning learn a number of local unrelated metrics. While this "independence" approach delivers an increased flexibility…

Machine Learning · Computer Science 2012-09-17 Jun Wang , Adam Woznica , Alexandros Kalousis

Geometric Machine Learning (GML) has shown that respecting non-Euclidean geometry in data spaces can significantly improve performance over naive Euclidean assumptions. In parallel, Quantum Machine Learning (QML) has emerged as a promising…

The deep connection among braids, knots and topological physics has provided valuable insights into studying topological states in various physical systems. However, identifying distinct braid groups and knot topology embedded in…

Mesoscale and Nanoscale Physics · Physics 2024-08-06 Jiangzhi Chen , Zi Wang , Yu-Tao Tan , Ce Wang , Jie Ren

Nuclei classification provides valuable information for histopathology image analysis. However, the large variations in the appearance of different nuclei types cause difficulties in identifying nuclei. Most neural network based methods are…

Computer Vision and Pattern Recognition · Computer Science 2023-02-23 Wei Lou , Xiang Wan , Guanbin Li , Xiaoying Lou , Chenghang Li , Feng Gao , Haofeng Li

Simulated configurations of flexible knotted rings confined inside a spherical cavity are fed into long-short term memory neural networks (LSTM NNs) designed to distinguish knot types. The results show that they perform well in knot…

Soft Condensed Matter · Physics 2023-04-12 Anna Braghetto , Sumanta Kundu , Marco Baiesi , Enzo Orlandini
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