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Continuous Dynamic Time Warping (CDTW) measures the similarity of polygonal curves robustly to outliers and to sampling rates, but the design and analysis of CDTW algorithms face multiple challenges. We show that CDTW cannot be computed…

Computational Geometry · Computer Science 2026-04-10 Kevin Buchin , Maike Buchin , Jan Erik Swiadek , Sampson Wong

We present a new open source python package, based on PyLightcurve and PyTorch, tailored for efficient computation and automatic differentiation of exoplanetary transits. The classes and functions implemented are fully vectorised, natively…

Earth and Planetary Astrophysics · Physics 2021-03-24 Mario Morvan , Angelos Tsiaras , Nikolaos Nikolaou , Ingo P. Waldmann

The Dynamic Time Warping (DTW) is a popular similarity measure between time series. The DTW fails to satisfy the triangle inequality and its computation requires quadratic time. Hence, to find closest neighbors quickly, we use bounding…

Databases · Computer Science 2008-10-07 Daniel Lemire

GPUs have become indispensable in high-performance computing, machine learning, and many other domains. Efficiently utilizing the memory subsystem on GPUs is critical for maximizing computing power through massive parallelism. Analyzing…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-07-28 Yanbo Zhao , Jinku Cui , Zecheng Li , Shuyin Jiao , Xu Liu , Jiajia Li

We present "torchGDM", a numerical framework for nano-optical simulations based on the Green's Dyadic Method (GDM). This toolkit combines a hybrid approach, allowing for both fully discretized nano-structures and structures approximated by…

Dynamic Time Wrapping (DTW) is a widely used algorithm for measuring similarities between two time series. It is especially valuable in a wide variety of applications, such as clustering, anomaly detection, classification, or video…

Machine Learning · Computer Science 2023-01-31 Hugo Lerogeron , Romain Picot-Clemente , Alain Rakotomamonjy , Laurent Heutte

Low-precision training reduces computational cost and produces efficient models. Recent research in developing new low-precision training algorithms often relies on simulation to empirically evaluate the statistical effects of quantization…

Machine Learning · Computer Science 2019-10-11 Tianyi Zhang , Zhiqiu Lin , Guandao Yang , Christopher De Sa

We propose to express the forward-backward algorithm in terms of operations between sparse matrices in a specific semiring. This new perspective naturally leads to a GPU-friendly algorithm which is easy to implement in Julia or any…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-12-02 Lucas Ondel , Léa-Marie Lam-Yee-Mui , Martin Kocour , Caio Filippo Corro , Lukáš Burget

We present cudaclaw, a CUDA-based high performance data-parallel framework for the solution of multidimensional hyperbolic partial differential equation (PDE) systems, equations describing wave motion. cudaclaw allows computational…

Mathematical Software · Computer Science 2018-05-24 H. Gorune Ohannessian , George Turkiyyah , Aron Ahmadia , David Ketcheson

Cardiac electrophysiology (CEP) simulations are increasingly used for understanding cardiac arrhythmias and guiding clinical decisions. However, these simulations typically require high-performance computing resources with numerous CPU…

Software Engineering · Computer Science 2025-10-15 Bei Zhou , Maximilian Balmus , Cesare Corrado , Ludovica Cicci , Shuang Qian , Steven A. Niederer

Sparse matrix representations are ubiquitous in computational science and machine learning, leading to significant reductions in compute time, in comparison to dense representation, for problems that have local connectivity. The adoption of…

Machine Learning · Computer Science 2023-11-13 Nicolas Nytko , Ali Taghibakhshi , Tareq Uz Zaman , Scott MacLachlan , Luke N. Olson , Matt West

Distributed training of large models consumes enormous computation resources and requires substantial engineering efforts to compose various training techniques. This paper presents SimpleFSDP, a PyTorch-native compiler-based Fully Sharded…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-11-07 Ruisi Zhang , Tianyu Liu , Will Feng , Andrew Gu , Sanket Purandare , Wanchao Liang , Francisco Massa

PyRadiomics-cuda is a GPU-accelerated extension of the PyRadiomics library, designed to address the computational challenges of extracting three-dimensional shape features from medical images. By offloading key geometric computations to GPU…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-20 Jakub Lisowski , Piotr Tyrakowski , Szymon Zyguła , Krzysztof Kaczmarski

Despite the rapid progress on research in adversarial robustness of deep neural networks (DNNs), there is little principled work for the time-series domain. Since time-series data arises in diverse applications including mobile health,…

Machine Learning · Computer Science 2023-05-10 Taha Belkhouja , Yan Yan , Janardhan Rao Doppa

A computational fluid dynamics (CFD) simulation framework for fluid-flow prediction is developed on the Tensor Processing Unit (TPU) platform. The TPU architecture is featured with accelerated dense matrix multiplication, large high…

Computational Physics · Physics 2022-03-02 Qing Wang , Matthias Ihme , Yi-Fan Chen , John Anderson

Fast and scalable alignment of time series is a fundamental challenge in many domains. The standard solution, Dynamic Time Warping (DTW), struggles with poor scalability and sensitivity to noise. We introduce TimePoint, a self-supervised…

Computer Vision and Pattern Recognition · Computer Science 2025-05-30 Ron Shapira Weber , Shahar Ben Ishay , Andrey Lavrinenko , Shahaf E. Finder , Oren Freifeld

We present a new implementation of the Floyd-Warshall All-Pairs Shortest Paths algorithm on CUDA. Our algorithm runs approximately 5 times faster than the previously best reported algorithm. In order to achieve this speedup, we applied a…

Distributed, Parallel, and Cluster Computing · Computer Science 2010-02-25 Ben Lund , Justin W Smith

In this paper, we present GATSPI, a novel GPU accelerated logic gate simulator that enables ultra-fast power estimation for industry sized ASIC designs with millions of gates. GATSPI is written in PyTorch with custom CUDA kernels for ease…

Machine Learning · Computer Science 2022-03-14 Yanqing Zhang , Haoxing Ren , Akshay Sridharan , Brucek Khailany

GPUs have been favored for training deep learning models due to their highly parallelized architecture. As a result, most studies on training optimization focus on GPUs. There is often a trade-off, however, between cost and efficiency when…

This paper presents the design, implementation, and evaluation of the PyTorch distributed data parallel module. PyTorch is a widely-adopted scientific computing package used in deep learning research and applications. Recent advances in…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-30 Shen Li , Yanli Zhao , Rohan Varma , Omkar Salpekar , Pieter Noordhuis , Teng Li , Adam Paszke , Jeff Smith , Brian Vaughan , Pritam Damania , Soumith Chintala
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