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Multi-organ segmentation of 3D medical images is fundamental with meaningful applications in various clinical automation pipelines. Although deep learning has achieved superior performance, the time and memory consumption of segmenting the…

Computer Vision and Pattern Recognition · Computer Science 2025-11-12 Xueqi Guo , Halid Ziya Yerebakan , Yoshihisa Shinagawa , Kritika Iyer , Gerardo Hermosillo Valadez

Transformers have achieved remarkable success across multiple fields, yet their impact on 3D medical image segmentation remains limited with convolutional networks still dominating major benchmarks. In this work, (A) we analyze current…

Computer Vision and Pattern Recognition · Computer Science 2026-05-01 Tassilo Wald , Saikat Roy , Fabian Isensee , Constantin Ulrich , Sebastian Ziegler , Dasha Trofimova , Raphael Stock , Michael Baumgartner , Gregor Köhler , Klaus Maier-Hein

The accurate segmentation of medical images is crucial for diagnosing and treating diseases. Recent studies demonstrate that vision transformer-based methods have significantly improved performance in medical image segmentation, primarily…

Computer Vision and Pattern Recognition · Computer Science 2024-05-22 Wentao Wang , Xi Xiao , Mingjie Liu , Qing Tian , Xuanyao Huang , Qizhen Lan , Swalpa Kumar Roy , Tianyang Wang

Medical image segmentation (MIS) aims to finely segment various organs. It requires grasping global information from both parts and the entire image for better segmenting, and clinically there are often certain requirements for segmentation…

Image and Video Processing · Electrical Eng. & Systems 2024-03-26 Dongwei Gan , Ming Chang , Juan Chen

Medical imaging segmentation plays a significant role in the automatic recognition and analysis of lesions. State-of-the-art methods, particularly those utilizing transformers, have been prominently adopted in 3D semantic segmentation due…

Computer Vision and Pattern Recognition · Computer Science 2024-08-02 Shengbo Tan , Zeyu Zhang , Ying Cai , Daji Ergu , Lin Wu , Binbin Hu , Pengzhang Yu , Yang Zhao

The Transformer architecture has opened a new paradigm in the domain of deep learning with its ability to model long-range dependencies and capture global context and has outpaced the traditional Convolution Neural Networks (CNNs) in many…

Computer Vision and Pattern Recognition · Computer Science 2025-03-12 Badhan Kumar Das , Ajay Singh , Saahil Islam , Gengyan Zhao , Andreas Maier

Medical image segmentation - the prerequisite of numerous clinical needs - has been significantly prospered by recent advances in convolutional neural networks (CNNs). However, it exhibits general limitations on modeling explicit long-range…

Computer Vision and Pattern Recognition · Computer Science 2021-07-13 Yundong Zhang , Huiye Liu , Qiang Hu

This study proposes a 3D semantic segmentation method for the spine based on the improved SwinUNETR to improve segmentation accuracy and robustness. Aiming at the complex anatomical structure of spinal images, this paper introduces a…

Computer Vision and Pattern Recognition · Computer Science 2025-03-18 Yanlin Xiang , Qingyuan He , Ting Xu , Ran Hao , Jiacheng Hu , Hanchao Zhang

Objective: Transformers, born to remedy the inadequate receptive fields of CNNs, have drawn explosive attention recently. However, the daunting computational complexity of global representation learning, together with rigid window…

Computer Vision and Pattern Recognition · Computer Science 2023-04-20 Xian Lin , Li Yu , Kwang-Ting Cheng , Zengqiang Yan

Transformer, the model of choice for natural language processing, has drawn scant attention from the medical imaging community. Given the ability to exploit long-term dependencies, transformers are promising to help atypical convolutional…

Computer Vision and Pattern Recognition · Computer Science 2022-02-07 Hong-Yu Zhou , Jiansen Guo , Yinghao Zhang , Lequan Yu , Liansheng Wang , Yizhou Yu

Transfer learning has gained attention in medical image analysis due to limited annotated 3D medical datasets for training data-driven deep learning models in the real world. Existing 3D-based methods have transferred the pre-trained models…

Computer Vision and Pattern Recognition · Computer Science 2021-04-29 Eunji Jun , Seungwoo Jeong , Da-Woon Heo , Heung-Il Suk

Owing to the success of transformer models, recent works study their applicability in 3D medical segmentation tasks. Within the transformer models, the self-attention mechanism is one of the main building blocks that strives to capture…

Computer Vision and Pattern Recognition · Computer Science 2024-05-07 Abdelrahman Shaker , Muhammad Maaz , Hanoona Rasheed , Salman Khan , Ming-Hsuan Yang , Fahad Shahbaz Khan

Medical image segmentation is a cornerstone of modern clinical diagnostics. While Vision Transformers that leverage shifted window-based self-attention have established new benchmarks in this field, they are often hampered by a critical…

Computer Vision and Pattern Recognition · Computer Science 2025-12-04 Fuchen Zheng , Xinyi Chen , Weixuan Li , Quanjun Li , Junhua Zhou , Xiaojiao Guo , Xuhang Chen , Chi-Man Pun , Shoujun Zhou

The Segment Anything Model (SAM), originally built on a 2D Vision Transformer (ViT), excels at capturing global patterns in 2D natural images but struggles with 3D medical imaging modalities like CT and MRI. These modalities require…

Computer Vision and Pattern Recognition · Computer Science 2024-12-10 Xiang Gao , Kai Lu

Given the prevalence of 3D medical imaging technologies such as MRI and CT that are widely used in diagnosing and treating diverse diseases, 3D segmentation is one of the fundamental tasks of medical image analysis. Recently,…

Computer Vision and Pattern Recognition · Computer Science 2023-02-10 Yuhui Zhang , Shih-Cheng Huang , Zhengping Zhou , Matthew P. Lungren , Serena Yeung

In recent years, transformer-based methods have achieved remarkable progress in medical image segmentation due to their superior ability to capture long-range dependencies. However, these methods typically suffer from two major limitations.…

Computer Vision and Pattern Recognition · Computer Science 2025-08-07 Zunhui Xia , Hongxing Li , Libin Lan

Deep neural networks have evolved as the leading approach in 3D medical image segmentation due to their outstanding performance. However, the ever-increasing model size and computation cost of deep neural networks have become the primary…

Computer Vision and Pattern Recognition · Computer Science 2025-02-20 Boqian Wu , Qiao Xiao , Shiwei Liu , Lu Yin , Mykola Pechenizkiy , Decebal Constantin Mocanu , Maurice Van Keulen , Elena Mocanu

While CNN-based methods have been the cornerstone of medical image segmentation due to their promising performance and robustness, they suffer from limitations in capturing long-range dependencies. Transformer-based approaches are currently…

Computer Vision and Pattern Recognition · Computer Science 2023-01-27 Reza Azad , Yiwei Jia , Ehsan Khodapanah Aghdam , Julien Cohen-Adad , Dorit Merhof

Convolutional neural networks (CNNs) have been the consensus for medical image segmentation tasks. However, they suffer from the limitation in modeling long-range dependencies and spatial correlations due to the nature of convolution…

Computer Vision and Pattern Recognition · Computer Science 2023-01-10 Moein Heidari , Amirhossein Kazerouni , Milad Soltany , Reza Azad , Ehsan Khodapanah Aghdam , Julien Cohen-Adad , Dorit Merhof

Accurate and efficient medical image segmentation is crucial but challenging due to anatomical variability and high computational demands on volumetric data. Recent hybrid CNN-Transformer architectures achieve state-of-the-art results but…

Image and Video Processing · Electrical Eng. & Systems 2025-07-28 Nand Kumar Yadav , Rodrigue Rizk , William CW Chen , KC Santosh