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Neural population activity often exhibits rich variability and temporal structure. This variability is thought to arise from single-neuron stochasticity, neural dynamics on short time-scales, as well as from modulations of neural firing…

Machine Learning · Statistics 2014-10-14 Mijung Park , Jakob H. Macke

Moving-habitat models track the density of a population whose suitable habitat shifts as a consequence of climate change. Whereas most previous studies in this area consider 1-dimensional space, we derive and study a spatially 2-dimensional…

Numerical Analysis · Mathematics 2023-12-14 Jane Shaw MacDonald , Yves Bourgault , Frithjof Lutscher

We present a model for evolving population which maintains genetic polymorphism. By introducing random mutation in the model population at a constant rate, we observe that the population does not become extinct but survives, keeping…

Soft Condensed Matter · Physics 2009-10-31 H. Y. Lee , D. Kim , M. Y. Choi

We investigate the behavioral patterns of a population of agents, each controlled by a simple biologically motivated neural network model, when they are set in competition against each other in the Minority Model of Challet and Zhang. We…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Joseph Wakeling , Per Bak

Predicting fitness of biologically-active populations, communities or systems in fluctuating environments is a long-standing challenge. Phenotypic plasticity and bet-hedging strategy, two key evolutionary traits living systems harness to…

Populations and Evolution · Quantitative Biology 2024-10-24 Sumana Bhattacharyya , Uttam Singh , Anupam Sengupta

Here we study the emergence of spontaneous leadership in large populations. In standard models of opinion dynamics, herding behavior is only obeyed at the local scale due to the interaction of single agents with their neighbors; while at…

Physics and Society · Physics 2015-06-11 Guillem Mosquera-Donate , Marian Boguna

I study a population model in which the reproduction rate lambda is inherited with mutation, favoring fast reproducers in the short term, but conflicting with a process that eliminates agglomerations of individuals. The model is a variant…

Statistical Mechanics · Physics 2021-06-02 Ronald Dickman

Advection of entities induced by gradients in attractant concentration fields is observed via diffusiophoresis in colloids and via chemotaxis in microorganisms. Mathematically, both diffusiophoresis and chemotaxis follow similar…

Populations and Evolution · Quantitative Biology 2024-10-07 Benjamin M. Alessio , Ankur Gupta

Environment plays a fundamental role in the competition for resources, and hence in the evolution of populations. Here, we study a well-mixed, finite population consisting of two strains competing for the limited resources provided by an…

Populations and Evolution · Quantitative Biology 2017-10-16 Karl Wienand , Erwin Frey , Mauro Mobilia

The recovery of training data from generative models ("model inversion") has been extensively studied for diffusion models in the data domain as a memorization/overfitting phenomenon. Latent diffusion models (LDMs), which operate on the…

Machine Learning · Computer Science 2026-03-26 Mingxing Rao , Bowen Qu , Daniel Moyer

Biological organisms exhibit diverse strategies for adapting to varying environments. For example, a population of organisms may express the same phenotype in all environments (`unvarying strategy'), or follow environmental cues and express…

Populations and Evolution · Quantitative Biology 2022-06-08 BingKan Xue , Pablo Sartori , Stanislas Leibler

Spatially extended population dynamics models that incorporate intrinsic noise serve as case studies for the role of fluctuations and correlations in biological systems. Including spatial structure and stochastic noise in predator-prey…

Statistical Mechanics · Physics 2018-01-09 Ulrich Dobramysl , Mauro Mobilia , Michel Pleimling , Uwe C. Täuber

A Hamilton-Jacobi formulation has been established previously for phenotypically structured population models where the solution concentrates as Dirac masses in the limit of small diffusion. Is it possible to extend this approach to spatial…

Analysis of PDEs · Mathematics 2014-02-24 Sepideh Mirrahimi

Since steep declines in a population's size also typically alter its composition, population bottlenecks are considered highly important for evolution. However, despite such significance, the mechanisms governing the impact of a given…

Populations and Evolution · Quantitative Biology 2022-06-28 Emanuele Crosato , Jeffrey N. Philippson , Shashi Thutupalli , Richard G. Morris

Recent empirical studies have confirmed the key roles of complex contagion mechanisms such as memory, social reinforcement, and decay effects in information diffusion and behaviour spreading. Inspired by this fact, we here propose a new…

Physics and Society · Physics 2014-08-20 Pengbi Cui , Ming Tang , Zhi-Xi Wu

The diffusion equation is extended by including spatial-temporal memory in such a manner that the conservation of the concentration is maintained. The additional memory term gives rise to the formation of non-trivial stationary solutions.…

Statistical Mechanics · Physics 2009-11-10 Steffen Trimper , Knud Zabrocki

Evolution occurs in populations of reproducing individuals. It is well known that population structure can affect evolutionary dynamics. Traditionally, natural selection is studied between mutants that differ in reproductive rate, but are…

Populations and Evolution · Quantitative Biology 2021-11-23 Josef Tkadlec , Kamran Kaveh , Krishnendu Chatterjee , Martin A. Nowak

We study a random walk model in which the jumping probability to a site is dependent on the number of previous visits to the site, as a model of the mobility with memory. To this end we introduce two parameters called the memory parameter…

Physics and Society · Physics 2016-11-11 Jeehye Choi , Jang-Il Sohn , K. -I. Goh , I. -M. Kim

Consider a species whose population density solves the steady diffusive logistic equation in a heterogeneous environment modeled with the help of a spatially non constant coefficient standing for a resources distribution in a given box. We…

Analysis of PDEs · Mathematics 2018-07-25 Idriss Mazari , Grégoire Nadin , Yannick Privat

The interaction of all mobile species with their environment hinges on their movement patterns: the places they visit and how frequently they go there. In human society, where the prevalent form of cohabitation is in cities, the highly…

Physics and Society · Physics 2020-02-17 Markus Schläpfer , Michael Szell , Hadrien Salat , Carlo Ratti , Geoffrey B. West
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