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Systems biology uses large networks of biochemical reactions to model the functioning of biological cells from the molecular to the cellular scale. The dynamics of dissipative reaction networks with many well separated time scales can be…

Molecular Networks · Quantitative Biology 2013-05-28 Vincent Noel , Dima Grigoriev , Sergei Vakulenko , Ovidiu Radulescu

We suggest a version of Nullstellensatz over the tropical semiring, the real numbers equipped with operations of maximum and addition.

Commutative Algebra · Mathematics 2007-05-23 Eugenii Shustin , Zur Izhakian

We study the subgroup structure of the semigroup of finitary tropical matrices under multiplication. We show that every maximal subgroup is isomorphic to the full linear automorphism group of a related tropical polytope, and that each of…

Group Theory · Mathematics 2012-03-13 Zur Izhakian , Marianne Johnson , Mark Kambites

The objective of this paper is to develop a general algebraic theory of supertropical matrix algebra, extending [11]. Our main results are as follows: * The tropical determinant (i.e., permanent) is multiplicative when all the determinants…

Commutative Algebra · Mathematics 2009-12-07 Zur Izhakian , Louis Rowen

A very brief introduction to tropical and idempotent mathematics is presented. Tropical mathematics can be treated as a result of a dequantization of the traditional mathematics as the Planck constant tends to zero taking imaginary values.…

Numerical Analysis · Mathematics 2012-09-11 G. L. Litvinov

Using the interpretation of the ultradiscretization procedure as a non-Archimedean valuation, we use results of tropical geometry to show how roots and poles manifest themselves in piece-wise linear systems as points of…

Mathematical Physics · Physics 2013-01-31 Christopher M. Ormerod

Generalizing supertropical algebras, we present a "layered" structure, "sorted" by a semiring which permits varying ghost layers, and indicate how it is more amenable than the "standard" supertropical construction in factorizations of…

Commutative Algebra · Mathematics 2011-08-16 Zur Izhakian , Manfred Knebusch , Louis Rowen

We develop a tropical analogue of the classical double description method allowing one to compute an internal representation (in terms of vertices) of a polyhedron defined externally (by inequalities). The heart of the tropical algorithm is…

Computational Geometry · Computer Science 2011-12-30 Xavier Allamigeon , Stephane Gaubert , Eric Goubault

In this paper, we consider the problem of stabilizing discrete-time linear systems by computing a nearby stable matrix to an unstable one. To do so, we provide a new characterization for the set of stable matrices. We show that a matrix $A$…

Optimization and Control · Mathematics 2019-03-29 Nicolas Gillis , Michael Karow , Punit Sharma

This paper presents an optimal dynamic control framework for bounded Jacobian nonlinear discrete-time (DT) systems with nonlinear observations affected by both state and process noise. Rather than directly stabilizing the uncertain system,…

Systems and Control · Electrical Eng. & Systems 2025-05-01 Mohammad Khajenejad

We prove that every connected component of an intersection of tropical hypersurfaces contains a point of their stable intersection unless their stable intersection is empty. This is done by studying algebraic hypersurfaces that tropicalize…

Combinatorics · Mathematics 2023-02-27 Yue Ren

We present two methods to algorithmically compute both least and greatest solutions of polynomial equation systems over absorptive semirings (with certain completeness and continuity assumptions), such as the tropical semiring. Both methods…

Logic in Computer Science · Computer Science 2021-08-17 Matthias Naaf

The state of limit cycles for a tropically discretized Sel'kov model becomes ultradiscrete due to phase lock caused by a saddle-node bifurcation. This property is essentially the same as the case of the negative feedback model, and…

Cellular Automata and Lattice Gases · Physics 2023-12-22 Yoshihiro Yamazaki , Shousuke Ohmori

The tropical rank of a semimodule of rational functions on a metric graph mirrors the concept of rank in linear algebra. Defined in terms of the maximal number of tropically independent elements within the semimodule, this quantity has…

Algebraic Geometry · Mathematics 2026-03-09 Omid Amini , Stéphane Gaubert , Lucas Gierczak

We introduce a family of discrete dynamical systems which includes, and generalizes, the mutation dynamics of rank two cluster algebras. These systems exhibit behavior associated with integrability, namely preservation of a symplectic form,…

Dynamical Systems · Mathematics 2023-04-28 John Machacek , Nicholas Ovenhouse

We investigate different notions of linear independence and of matrix rank that are relevant for max-plus or tropical semirings. The factor rank and tropical rank have already received attention, we compare them with the ranks defined in…

Commutative Algebra · Mathematics 2009-12-13 Marianne Akian , Stephane Gaubert , Alexander Guterman

An unconstrained optimization problem is formulated in terms of tropical mathematics to minimize a functional that is defined on a vector set by a matrix and calculated through multiplicative conjugate transposition. For some particular…

Optimization and Control · Mathematics 2015-01-30 Nikolai Krivulin

A time discretization method is called strongly stable, if the norm of its numerical solution is nonincreasing. It is known that, even for linear semi-negative problems, many explicit Runge--Kutta (RK) methods fail to preserve this…

Numerical Analysis · Mathematics 2019-12-30 Zheng Sun , Chi-Wang Shu

Maxmin-$\omega$ dynamical systems were previously introduced as a generalization of dynamical systems expressed by tropical linear algebra. To describe steady states of such systems one has to study an eigenproblem of the form…

Rings and Algebras · Mathematics 2024-07-25 Muhammad Syifa'ul Mufid , Ebrahim Patel , Sergei Sergeev

We examine a multidimensional optimisation problem in the tropical mathematics setting. The problem involves the minimisation of a nonlinear function defined on a finite-dimensional semimodule over an idempotent semifield subject to linear…

Optimization and Control · Mathematics 2015-03-16 Nikolai Krivulin