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PyRadiomics-cuda is a GPU-accelerated extension of the PyRadiomics library, designed to address the computational challenges of extracting three-dimensional shape features from medical images. By offloading key geometric computations to GPU…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-20 Jakub Lisowski , Piotr Tyrakowski , Szymon Zyguła , Krzysztof Kaczmarski

We present MHDuet, an open source evolution code for general relativistic magnetohydrodynamics with neutrino transport. The code solves the full set of Einstein equations coupled to a relativistic, magnetized fluid with an M1 neutrino…

Ptychography is an emerging imaging technique that is able to provide wavelength-limited spatial resolution from specimen with extended lateral dimensions. As a scanning microscopy method, a typical two-dimensional image requires a number…

We develop a new three-dimensional time-dependent radiative transfer code, TRINITY (Time-dependent Radiative transfer In Near-Infrared TomographY), for in-vivo diffuse optical tomography (DOT). The simulation code is based on the design of…

Medical Physics · Physics 2022-01-10 Hidenobu Yajima , Makito Abe , Masayuki Umemura , Yuichi Takamizu , Yoko Hoshi

We develop a Ly-alpha radiative transfer (RT) Monte Carlo code for cosmological simulations.High resolution,along with appropriately treated cooling can result in simulated environments with very high optical depths.Thus,solving the…

Astrophysics · Physics 2009-11-13 Argyro Tasitsiomi

Modern graphics processing units (GPUs) provide impressive computing resources, which can be accessed conveniently through the CUDA programming interface. We describe how GPUs can be used to considerably speed up molecular dynamics (MD)…

Computational Physics · Physics 2011-04-08 Peter H. Colberg , Felix Höfling

We present an improved inverse ray-shooting code based on GPUs for generating microlensing magnification maps. In addition to introducing GPUs for acceleration, we put the efforts in two aspects: (i) A standard circular lens plane is…

Instrumentation and Methods for Astrophysics · Physics 2022-06-08 Wenwen Zheng , Xuechun Chen , Guoliang Li , Hou-zun Chen

We discuss the current development of MC/DC (Monte Carlo Dynamic Code). MC/DC is primarily designed to serve as an exploratory Python-based MC transport code. However, it seeks to offer improved performance, massive scalability, and backend…

Computational Physics · Physics 2023-05-15 Ilham Variansyah , J. P. Morgan , Jordan Northrop , Kyle E. Niemeyer , Ryan G. McClarren

This work presents an updated and extended guide on methods of a proper acceleration of the Monte Carlo integration of stochastic differential equations with the commonly available NVIDIA Graphics Processing Units using the CUDA programming…

Computational Physics · Physics 2015-04-23 J. Spiechowicz , M. Kostur , L. Machura

Monte Carlo rendering algorithms are widely used to produce photorealistic computer graphics images. However, these algorithms need to sample a substantial amount of rays per pixel to enable proper global illumination and thus require an…

Computer Vision and Pattern Recognition · Computer Science 2021-06-25 Qiqi Hou , Zhan Li , Carl S Marshall , Selvakumar Panneer , Feng Liu

Ultra-high dose rate irradiations to water indicate an enhancement of radical-radical reactions, which could potentially correlate with the Flash effect. The purpose of this work was to extend gMicroMC to support multiple pulse simulations…

Medical Physics · Physics 2025-09-04 Miguel Molina-Hernandez , Patricia Gonçalves , Yujie Chi , Joao Seco

High-dimensional multimodal sampling problems from lattice field theory (LFT) have become important benchmarks for machine learning assisted sampling methods. We show that GPU-accelerated particle methods, Sequential Monte Carlo (SMC) and…

Machine Learning · Statistics 2025-11-20 David Yallup

Next-generation gravitational wave detectors such as Cosmic Explorer, the Einstein Telescope, and LISA, demand highly accurate and extensive gravitational wave (GW) catalogs to faithfully extract physical parameters from observed signals.…

General Relativity and Quantum Cosmology · Physics 2025-05-20 Samuel D. Tootle , Leonardo R. Werneck , Thiago Assumpção , Terrence Pierre Jacques , Zachariah B. Etienne

Computational ghost imaging is a promising technique for single-pixel imaging because it is robust to disturbance and can be operated over broad wavelength bands, unlike common cameras. However, one disadvantage of this method is that it…

Image and Video Processing · Electrical Eng. & Systems 2018-10-16 Ikuo Hoshi , Tomoyoshi Shimobaba , Takashi Kakue , Tomoyoshi Ito

We present Generative Monte Carlo (GMC), a novel paradigm for particle transport simulation that integrates generative artificial intelligence directly into the stochastic solution of the linear Boltzmann equation. By reformulating the…

Computational Physics · Physics 2025-12-17 Joseph A. Farmer , Aidan Murray , Johannes Krotz , Ryan G. McClarren

Emerging new technologies in plasma simulations allow tracking billions of particles while computing their radiative spectra. We present a visualization of the relativistic Kelvin-Helmholtz Instability from a simulation performed with the…

Plasma Physics · Physics 2014-07-01 Axel Huebl , David Pugmire , Felix Schmitt , Richard Pausch , Michael Bussmann

Today, cheap numerical hardware offers huge amounts of parallel computing power, much of which is used for the task of fitting neural networks to data. Adoption of this hardware to accelerate statistical Markov chain Monte Carlo (MCMC)…

Computation · Statistics 2024-11-08 Pavel Sountsov , Colin Carroll , Matthew D. Hoffman

We present direct astrophysical N-body simulations with up to a few million bodies using our parallel MPI/CUDA code on large GPU clusters in China, Ukraine and Germany, with different kinds of GPU hardware. These clusters are directly…

Instrumentation and Methods for Astrophysics · Physics 2013-12-09 P. Berczik , R. Spurzem , L. Wang , S. Zhong , O. Veles , I. Zinchenko , S. Huang , M. Tsai , G. Kennedy , S. Li , L. Naso , C. Li

Quasiparticle self-consistent many-body perturbation theory (MBPT) methods that update both eigenvalues and eigenvectors can calculate the excited-state properties of molecular systems without depending on the choice of starting points.…

Materials Science · Physics 2023-12-05 Young-Moo Byun , Jejoong Yoo

The Nvidia GPU architecture has introduced new computing elements such as the \textit{tensor cores}, which are special processing units dedicated to perform fast matrix-multiply-accumulate (MMA) operations and accelerate \textit{Deep…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-12 Roberto Carrasco , Raimundo Vega , Cristóbal A. Navarro