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Related papers: Viscous vertex model for active epithelial tissues

200 papers

The Vertex Model for epithelia models the apical surface of the tissue by a tiling, with polygons representing cells and edges representing cell-cell junctions. The mechanics are described by an energy governed by deviations from a target…

Biological Physics · Physics 2024-10-10 Michael F. Staddon , Carl D. Modes

Biological cells can actively tune their intracellular architecture according to their overall shape. Here we explore the rheological implication of such coupling in a minimal model of a dense cellular material where each cell exerts an…

Soft Condensed Matter · Physics 2022-04-13 Shao-Zhen Lin , Matthias Merkel , Jean-François Rupprecht

We present a meshless numerical method for simulating the dynamics of axisymmetric vesicles in a viscous medium. Key innovations include: (1) adaptive reparameterization based on local length scales, reducing the number of required…

Computational Physics · Physics 2026-04-17 M. A. Shishkin

In this work, we investigate the dynamics of the number density fluctuations of a dilute suspension of active particles in a linear viscoelastic fluid. We propose a model for the frequency-dependent diffusion coefficient of the active…

Soft Condensed Matter · Physics 2022-11-08 Juan Ruben Gomez-Solano , Rosalio F. Rodriguez , Elizabeth Salinas-Rodriguez

We show that a viscoelastic thin sheet driven out of equilibrium by active structural remodelling develops a rich variety of shapes as a result of a competition between viscous relaxation and activity. In the regime where active processes…

Soft Condensed Matter · Physics 2020-02-26 D. A. Matoz-Fernandez , Fordyce A. Davidson , Nicola R. Stanley-Wall , Rastko Sknepnek

We propose an improved viscosity model accounting for experiments of emulsions of two immiscible liquids at arbitrary volume fractions and low shear rates. The model is based on a recursive-differential method formulated in terms of the…

Soft Condensed Matter · Physics 2009-04-01 Carlos I. Mendoza , I. Santamaria-Holek

We suggest a scalar model for deformation and flow of an amorphous material such as a foam or an emulsion. To describe elastic, plastic and viscous behaviours, we use three scalar variables: elastic deformation, plastic deformation rate and…

Soft Condensed Matter · Physics 2009-11-11 Philippe Marmottant , François Graner

Epithelial tissues dynamically reshape through local mechanical interactions among cells, a process well captured by vertex models. Yet their many tunable parameters make inference and optimization challenging, motivating computational…

We present a theory of the interfacial stability of two immiscible electrolytes under the coupled action of pressure gradients and electric fields in a Hele-Shaw cell or porous medium. Mathematically, our theory describes a phenomenon of…

Fluid Dynamics · Physics 2017-11-01 Mohammad Mirzadeh , Martin Z. Bazant

The morphogenesis of cells and tissues involves an interplay between chemical signals and active forces on their surrounding surface layers. The complex interaction of hydrodynamics and material flows on such active surfaces leads to…

Cell Behavior · Quantitative Biology 2023-06-30 Sebastian Aland , Claudia Wohlgemuth

One of the main theoretical issues in developing a theory of anisotropic viscoelastic media at finite strains lies in the proper definition of the material symmetry group and its evolution with time. In this paper the matter is discussed…

Soft Condensed Matter · Physics 2021-02-03 Jacopo Ciambella , Paola Nardinocchi

We investigate the hydrodynamic stability and the formation of patterns in a continuum model of epithelial layers, able to account for the interplay between mechanical activity, lateral adhesion and the $6-$fold orientational order…

Soft Condensed Matter · Physics 2025-02-19 Josep-Maria Armengol-Collado , Leonardo Puggioni , Livio N. Carenza , Luca Giomi

Our fluid dynamics video shows the response of a layer of viscoelastic fluid to an array of four-roll mills steadily rotating underneath. When the relaxation time of the fluid is sufficiently long, the fluid divides into "cells" with a…

Fluid Dynamics · Physics 2009-10-20 Bin Liu , Jun Zhang , Michael Shelley

This work presents a unified viscoelastic-viscoplastic continuum framework for modeling rate-dependent granular flows across regimes. The formulation incorporates two distinct rate-dependent mechanisms, namely micro-inertia and viscoelastic…

Soft Condensed Matter · Physics 2026-04-28 Bodhinanda Chandra , Sachith Dunatunga , Ken Kamrin

Recent developments in vortex particle methods for simulating three-dimensional incompressible flows are presented. A lightweight, dynamic Large-Eddy Simulation model is tested, featuring a dynamic procedure that relies solely on Lagrangian…

Fluid Dynamics · Physics 2026-01-13 Flavio A. C. Martins , Alexander van Zuijlen , Carlos J. Simao Ferreira

The motion of several plates in an inviscid and incompressible fluid is studied numerically using a vortex sheet model. Two to four plates are initially placed in-line, separated by a specified distance, and actuated in the vertical…

Fluid Dynamics · Physics 2026-05-19 Monika Nitsche , Anand U. Oza , Michael Siegel

A continuum model of epithelial tissue mechanics was formulated using cellular-level mechanical ingredients and cell morphogenetic processes, including cellular shape changes and cellular rearrangements. This model can include finite…

Tissues and Organs · Quantitative Biology 2017-09-06 Shuji Ishihara , Philippe Marcq , Kaoru Sugimura

We investigate the motion of the contact surface centroid for contractile bodies on substrates with a viscous friction law and when inertial forces are negligible. We deduce a set of sufficient conditions that ensure that the surface…

Soft Condensed Matter · Physics 2020-12-04 Jose J. Munoz , Lucie Condamin , David Doste

We consider the free boundary problem for a layer of compressible viscous barotropic fluid lying above a fixed rigid bottom and below the atmosphere of positive constant pressure. The fluid dynamics is governed by the compressible…

Analysis of PDEs · Mathematics 2024-11-01 Ting Sun , Yanjin Wang

Understanding surface mechanics of soft solids, such as soft polymeric gels, is crucial in many engineering processes, such as dynamic wetting and adhesive failure. In these situations, a combination of capillary and elastic forces drives…

Soft Condensed Matter · Physics 2020-12-02 Qin Xu , Lawrence A. Wilen , Katharine E. Jensen , Robert W. Style , Eric R. Dufresne